C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393991 TSC22D4-002 ENSG00000166925 9606 - 7:100466538-100479232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393991
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393991 8.637±0.00 15.134±0.00 0.333±0.00 11.153±0.00 6.325±6.04 3.800±2.90 9.394±9.12 1.827±0.67 9.776±8.75 0.143±0.00 9.367±5.40 12.062±4.32 21.294±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0045892 NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100539 Tsc22d4-002 protein_coding Mus_musculus 0 634
ENSMUST00000110985 Tsc22d4-006 protein_coding Mus_musculus 0 403
ENSMUST00000141733 Tsc22d4-005 protein_coding Mus_musculus 0 401
ENSMUST00000100540 Tsc22d4-001 protein_coding Mus_musculus 0 305
ENSMUST00000129399 Tsc22d4-009 retained_intron Mus_musculus 0 219
ENSDART00000050457 protein_coding Danio_rerio 2e-31 141
ENSMUST00000129349 Tsc22d4-003 retained_intron Mus_musculus 3e-25 121

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