C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase family 6, subfamily A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085192 Aldh6a1-201 ENSMUSG00000021238 10090 - 12:84430723-84450950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085192 71.803±18.16 38.350±4.61 28.435±6.24 8.523±1.24 70.648±15.47 5.790±1.88 51.558±4.11 180.219±6.88 50.223±33.72 20.274±2.26 44.607±2.02 17.341±8.40 5.797±3.03 8.469±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743
CIL_000234 CIL_000234_0002 CGP 12:84430723-84531533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004491 IEA methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006210 IEA thymine catabolic process
GO:0006574 IEA valine catabolic process
GO:0018478 IEA malonate-semialdehyde dehydrogenase (acetylating) activity
GO:0044822 IEA poly(A) RNA binding
GO:0050873 IDA brown fat cell differentiation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075520 aldh6a1-001 protein_coding Danio_rerio 0 676
ENST00000350259 ALDH6A1-002 protein_coding Homo_sapiens 0 1879
ENST00000394009 CCDC176-001 protein_coding Homo_sapiens 0 268
ENST00000553458 ALDH6A1-001 protein_coding Homo_sapiens 0 2218
ENST00000553814 ALDH6A1-004 processed_transcript Homo_sapiens 0 213
ENST00000554231 ALDH6A1-005 retained_intron Homo_sapiens 0 917
ENST00000554501 ALDH6A1-003 retained_intron Homo_sapiens 0 1759
ENST00000555126 ALDH6A1-007 protein_coding Homo_sapiens 0 1306
ENST00000556852 ALDH6A1-006 processed_transcript Homo_sapiens 0 342

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