C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein regulator of cytokinesis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394249 PRC1-001 ENSG00000198901 9606 - 15:90966038-90994495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000394249
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000394249 0.534±0.00 0.734±0.00 1.498±0.81 0.854±0.15 1.621±0.94 0.367±0.28 0.494±0.00 0.215±0.00 0.606±0.00 4.919±4.50 5.660±1.59 13.977±6.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0001 VISTA 15:90522657-91123707
CIL_0001XZ CIL_0001XZ_0002 CGP 15:90966038-91022603

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000022 TAS mitotic spindle elongation
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000910 IDA:IEA cytokinesis
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0005876 TAS spindle microtubule
GO:0005886 IDA plasma membrane
GO:0008017 IEA microtubule binding
GO:0015630 IDA microtubule cytoskeleton
GO:0019901 IPI protein kinase binding
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174172 Prc1-007 protein_coding Mus_musculus 0 2004
ENSMUST00000163812 Prc1-002 protein_coding Mus_musculus 0 1786
ENSMUST00000047558 Prc1-001 protein_coding Mus_musculus 0 1744
ENSMUST00000173824 Prc1-006 protein_coding Mus_musculus 0 1679
ENSMUST00000172911 Prc1-003 retained_intron Mus_musculus 0 1520
ENSMUST00000174199 Prc1-005 protein_coding Mus_musculus 0 1371
ENSMUST00000174051 Prc1-008 protein_coding Mus_musculus 0 817
ENSMUST00000173170 Prc1-011 protein_coding Mus_musculus 0 606
ENSMUST00000117910 Gm13176-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000174111 Prc1-009 protein_coding Mus_musculus 0 224
ENSMUST00000174254 Prc1-010 retained_intron Mus_musculus 0 213
ENSMUST00000173914 Prc1-004 retained_intron Mus_musculus 9e-18 97

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