C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005993-ENSDARG00000044813 CGP 7955 7:51810285-51852383
GeneTranscriptPositionBiotype
ENSDARG00000005993 (prc1b)
protein regulator of cytokinesis 1b 		ENSDART00000134941 (prc1b-001) 51810285-51824630 protein_coding
ENSDART00000141926 (prc1b-002) 51821420-51824314 protein_coding
ENSDARG00000044813 (vps33b)
vacuolar protein sorting 33B 		ENSDART00000065868 (vps33b-001) 51833085-51852383 protein_coding
CIL_0001XZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198901-ENSG00000184056 CGP 9606 15:90966038-91022603
GeneTranscriptPositionBiotype
ENSG00000184056 (VPS33B)
vacuolar protein sorting 33 homolog B (yeast) 		ENST00000333371 (VPS33B-001) 90998416-91022603 protein_coding
ENST00000535906 (VPS33B-003) 90998675-91022596 protein_coding
ENST00000554264 (VPS33B-008) 91007902-91018036 retained_intron
ENST00000554660 (VPS33B-005) 90999331-91001005 retained_intron
ENST00000556096 (VPS33B-002) 91006001-91022603 retained_intron
ENST00000557358 (VPS33B-006) 91013804-91022596 processed_transcript
ENST00000557470 (VPS33B-007) 90998673-91001433 retained_intron
ENST00000574755 (VPS33B-004) 90998675-91022513 nonsense_mediated_decay
ENSG00000200142 (Y_RNA)
Y RNA 		ENST00000363272 (Y_RNA.1-315) 90977208-90977305 misc_RNA
ENSG00000258725 (PRC1-AS1)
PRC1 antisense RNA 1 		ENST00000554388 (PRC1-AS1-002) 90966372-90988624 antisense
ENST00000556200 (PRC1-AS1-001) 90966345-90973106 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XZ_0001ENSDARG00000005993ENSDART00000134941ENSDART00000141926ENSDARG00000044813ENSDART00000065868CIL_0001XZ_0002ENSG00000184056ENST00000333371ENST00000535906ENST00000554264ENST00000554660ENST00000556096ENST00000557358ENST00000557470ENST00000574755ENSG00000200142ENST00000363272ENSG00000258725ENST00000554388ENST00000556200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XZ_0001ENSDARG00000005993ENSDART00000134941ENSDARG00000044813ENSDART00000065868CIL_0001XZ_0002ENSG00000184056ENST00000333371ENST00000535906ENST00000554264ENST00000556096ENST00000574755ENSG00000200142ENST00000363272ENSG00000258725ENST00000554388ENST00000556200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005993 ENSDART00000134941 N/A N/A N/A 0.478±0.11 N/A N/A 0.275±0.08 5.854±0.00 0.156±0.00 N/A 0.131±0.00 N/A N/A N/A
ENSDART00000141926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000044813 ENSDART00000065868 N/A N/A N/A 7.879±2.80 N/A N/A 4.138±2.40 3.108±0.00 0.541±0.00 N/A 1.013±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184056 ENST00000333371 0.477±0.00 1.291±0.00 N/A 2.093±0.22 0.478±0.00 0.249±0.00 0.298±0.00 0.919±0.22 0.352±0.00 0.539±0.09 0.545±0.00 1.920±0.49 1.375±0.22 1.030±0.13
ENST00000535906 2.031±0.00 5.701±0.00 N/A 7.503±0.00 2.699±0.00 2.831±0.00 1.090±0.00 3.459±0.00 1.684±0.00 1.003±0.00 1.180±0.00 2.567±0.31 3.583±0.49 4.384±0.70
ENST00000554264 N/A N/A N/A N/A 2.541±0.00 N/A N/A N/A N/A N/A 3.630±0.00 2.179±0.00 N/A N/A
ENST00000554660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.845±0.00
ENST00000557358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574755 0.810±0.00 N/A N/A 2.163±0.00 0.854±0.30 N/A 0.236±0.00 1.017±0.13 1.130±0.29 1.175±0.82 N/A 1.137±0.00 2.896±0.25 2.905±0.00
ENSG00000200142 ENST00000363272 N/A N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.009±0.00
ENSG00000258725 ENST00000554388 N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A 0.144±0.00 N/A N/A 8.437±0.00
ENST00000556200 N/A 4.130±0.00 N/A 3.881±2.47 N/A 2.170±0.00 1.474±0.00 N/A 0.267±0.00 2.358±0.00 N/A N/A N/A N/A

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