C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuromedin B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394588 NMB-002 ENSG00000197696 9606 - 15:84655129-84658563 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000394588
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000394588 3.648±0.00 2.188±1.76 17.306±0.00 1.560±0.00 0.325±0.00 4.761±0.00 1.421±0.00 1.553±0.93 0.680±0.17 1.983±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N2 CIL_0000N2_0001 CGP 15:84639281-84658563
CIL_0003XQ CIL_0003XQ_0002 CGP 15:84655129-84716716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005179 TAS hormone activity
GO:0005576 TAS extracellular region
GO:0007165 TAS signal transduction
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007218 IEA neuropeptide signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0008284 IEA positive regulation of cell proliferation
GO:0031710 IEA neuromedin B receptor binding
GO:0042593 IEA glucose homeostasis
GO:0043005 IEA neuron projection
GO:0046887 IEA positive regulation of hormone secretion
GO:0046888 IEA negative regulation of hormone secretion
GO:0050482 IEA arachidonic acid secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119428 Nmb-003 protein_coding Mus_musculus 0 483
ENSMUST00000026817 Nmb-001 protein_coding Mus_musculus 0 462

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