C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 13B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394859 ANKRD13B-001 ENSG00000198720 9606 + 17:29593468-29614761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLungOvaryTestisENST00000394859
Transcript ID Adipose Breast Colon Heart Kidney Lung Ovary Testis
ENST00000394859 2.260±0.00 1.899±0.00 3.665±0.00 2.529±0.00 0.477±0.00 1.298±0.00 6.505±0.35 4.123±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870
CIL_0004GJ CIL_0004GJ_0002 CGP 17:29573469-29614761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037593 Ankrd13b-001 protein_coding Mus_musculus 0 3188
ENSMUST00000092892 Ankrd13b-201 protein_coding Mus_musculus 0 2350
ENSMUST00000145934 Ankrd13b-005 protein_coding Mus_musculus 0 1319
ENSMUST00000143872 Ankrd13b-004 retained_intron Mus_musculus 0 1155
ENSMUST00000135227 Ankrd13b-003 retained_intron Mus_musculus 0 861
ENSMUST00000127291 Ankrd13b-002 protein_coding Mus_musculus 0 442

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