C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395256 RP11-380G5.3-001 ENSG00000213613 9606 + 10:87945502-87946024 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395256
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395256 2.101±0.00 2.414±0.00 1.605±0.00 0.949±0.15 0.969±0.70 2.653±2.26 0.681±0.32 0.532±0.32 1.851±1.80 3.591±1.22 0.300±0.11 0.774±0.32 0.277±0.06 0.987±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001S4 CIL_0001S4_0001 CGP 10:87863113-88584530

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079733 Gm10036-201 protein_coding Mus_musculus 0 479
ENSMUST00000125726 Rpl11-003 processed_transcript Mus_musculus 0 473
ENSMUST00000102536 Rpl11-001 protein_coding Mus_musculus 0 473
ENSMUST00000084614 Gm10288-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000085631 Gm7589-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000155873 Rpl11-002 protein_coding Mus_musculus 0 444
ENSMUST00000118690 Gm12901-001 processed_pseudogene Mus_musculus 0 348
ENSDART00000063870 rpl11-201 protein_coding Danio_rerio 0 283
ENSMUST00000133613 Rpl11-008 processed_transcript Mus_musculus 7e-32 141
ENSDART00000075902 CABZ01086825.1-201 protein_coding Danio_rerio 0.00000005 62

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