C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Z-DNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395822 ZBP1-003 ENSG00000124256 9606 - 20:57603846-57620576 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverPlacentaTestisENST00000395822
Transcript ID Adipose Brain Breast Colon Heart Liver Placenta Testis
ENST00000395822 0.039±0.00 0.042±0.01 0.810±0.00 0.235±0.11 0.045±0.00 0.132±0.00 0.179±0.02 0.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0001 VISTA 20:57109440-57710361
CIL_0008BA CIL_0008BA_0001 VISTA 20:57139654-57744237
CIL_0005K4 CIL_0005K4_0001 CGP 20:57561080-57620576
CIL_0005K6 CIL_0005K6_0001 CGP 20:57603846-57711536

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003692 NAS left-handed Z-DNA binding
GO:0003723 IEA RNA binding
GO:0003726 IEA double-stranded RNA adenosine deaminase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response

Homologs

No Homologs available.

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