C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducing adaptor family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396225 STAP1-002 ENSG00000035720 9606 + 4:67558728-67607337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000396225
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000396225 0.067±0.00 0.736±0.00 0.055±0.00 0.302±0.00 0.277±0.19 0.055±0.00 2.350±0.00 0.105±0.09 0.373±0.00 0.123±0.05 0.153±0.00 0.193±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M7 CIL_0000M7_0001 CGP 4:67471803-67607337
CIL_0000M6 CIL_0000M6_0001 CGP 4:67558728-67701179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006886 TAS intracellular protein transport
GO:0007165 TAS signal transduction
GO:0043234 IDA protein complex
GO:0061025 TAS membrane fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031171 Stap1-001 protein_coding Mus_musculus 0 889
ENSMUST00000123393 Stap1-002 retained_intron Mus_musculus 0 832
ENSMUST00000138076 Stap1-005 processed_transcript Mus_musculus 0 322

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