C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: engulfment and cell motility 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396391 ELMO2-201 ENSG00000062598 9606 - 20:46366055-46406632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLungOvaryPlacentaTestisENST00000396391
Transcript ID Adrenal Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000396391 2.008±0.00 3.037±0.00 2.337±0.00 2.355±0.00 3.296±0.00 2.506±0.00 4.122±0.37 3.195±0.23 6.699±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G4 CIL_0006G4_0001 CGP 20:46345980-46432985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006909 IEA phagocytosis
GO:0006915 IEA apoptotic process
GO:0016020 IDA membrane
GO:0017124 IEA SH3 domain binding
GO:0030971 IPI receptor tyrosine kinase binding
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0060326 IMP cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094329 Elmo2-008 protein_coding Mus_musculus 0 2737
ENSMUST00000103091 Elmo2-001 protein_coding Mus_musculus 0 2737
ENSMUST00000103088 Elmo2-010 protein_coding Mus_musculus 0 2473
ENSMUST00000071699 Elmo2-004 protein_coding Mus_musculus 0 2473
ENSMUST00000074046 Elmo2-007 protein_coding Mus_musculus 0 1738
ENSMUST00000148643 Elmo2-002 protein_coding Mus_musculus 0 1029
ENSMUST00000127496 Elmo2-012 processed_transcript Mus_musculus 0 1003
ENSMUST00000072519 Elmo1-001 protein_coding Mus_musculus 0 830
ENSMUST00000137188 Elmo2-009 protein_coding Mus_musculus 0 730
ENSMUST00000126318 Elmo2-006 nonsense_mediated_decay Mus_musculus 0 676
ENSMUST00000149844 Elmo2-011 retained_intron Mus_musculus 0 479
ENSMUST00000133205 Elmo2-005 protein_coding Mus_musculus 0 472
ENSDART00000092903 ELMO2-201 protein_coding Danio_rerio 0 254
ENSMUST00000128690 Elmo2-003 protein_coding Mus_musculus 2.99878e-43 182

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