C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006G4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080189-ENSG00000062598 CGP 9606 20:46345980-46432985
GeneTranscriptPositionBiotype
ENSG00000062598 (ELMO2)
engulfment and cell motility 2 		ENST00000290246 (ELMO2-001) 46366049-46406617 protein_coding
ENST00000352077 (ELMO2-004) 46367360-46394482 protein_coding
ENST00000372176 (ELMO2-003) 46366050-46406559 protein_coding
ENST00000396391 (ELMO2-201) 46366055-46406632 protein_coding
ENST00000425546 (ELMO2-005) 46372835-46386164 protein_coding
ENST00000450812 (ELMO2-002) 46375286-46406604 protein_coding
ENST00000452857 (ELMO2-007) 46366054-46373515 protein_coding
ENST00000460474 (ELMO2-012) 46383468-46406615 processed_transcript
ENST00000462491 (ELMO2-015) 46373241-46386164 processed_transcript
ENST00000462593 (ELMO2-013) 46387505-46394437 processed_transcript
ENST00000464448 (ELMO2-017) 46370443-46373495 processed_transcript
ENST00000467800 (ELMO2-006) 46366050-46375771 nonsense_mediated_decay
ENST00000469801 (ELMO2-011) 46383416-46406615 processed_transcript
ENST00000480042 (ELMO2-014) 46379919-46386165 processed_transcript
ENST00000481852 (ELMO2-016) 46374351-46376967 processed_transcript
ENST00000487583 (ELMO2-008) 46387427-46432985 processed_transcript
ENST00000488853 (ELMO2-010) 46374438-46406599 processed_transcript
ENST00000497412 (ELMO2-009) 46386124-46406624 processed_transcript
ENSG00000080189 (SLC35C2)
solute carrier family 35 (GDP-fucose transporter), member C2 		ENST00000243896 (SLC35C2-002) 46349528-46364401 protein_coding
ENST00000317734 (SLC35C2-201) 46349530-46364458 protein_coding
ENST00000372227 (SLC35C2-003) 46349528-46363174 protein_coding
ENST00000372230 (SLC35C2-013) 46349528-46364395 protein_coding
ENST00000420518 (SLC35C2-006) 46352164-46358506 protein_coding
ENST00000424568 (SLC35C2-007) 46355104-46358764 protein_coding
ENST00000480329 (SLC35C2-009) 46350355-46355195 processed_transcript
ENST00000481809 (SLC35C2-011) 46352150-46364381 processed_transcript
ENST00000484188 (SLC35C2-008) 46358427-46364361 processed_transcript
ENST00000484318 (SLC35C2-012) 46352123-46364390 processed_transcript
ENST00000487729 (SLC35C2-010) 46350771-46357701 processed_transcript
ENST00000493599 (SLC35C2-004) 46349528-46353197 processed_transcript
ENST00000543605 (SLC35C2-001) 46345980-46364404 protein_coding
ENSG00000215452 (ZNF663P)
zinc finger protein 663, pseudogene 		ENST00000400371 (ZNF663P-002) 46414228-46459276 processed_transcript
ENST00000472805 (ZNF663P-001) 46455587-46457085 unitary_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006G4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017664-ENSMUSG00000017670 CGP 10090 2:165276554-165326479
GeneTranscriptPositionBiotype
ENSMUSG00000017664 (Slc35c2)
solute carrier family 35, member C2 		ENSMUST00000017808 (Slc35c2-008) 165276554-165287827 protein_coding
ENSMUST00000109298 (Slc35c2-014) 165276554-165287755 protein_coding
ENSMUST00000109299 (Slc35c2-013) 165276554-165287755 protein_coding
ENSMUST00000109300 (Slc35c2-012) 165276554-165287869 protein_coding
ENSMUST00000125550 (Slc35c2-015) 165276554-165277841 retained_intron
ENSMUST00000129210 (Slc35c2-002) 165280874-165286552 protein_coding
ENSMUST00000129336 (Slc35c2-005) 165278354-165283368 protein_coding
ENSMUST00000130393 (Slc35c2-001) 165282879-165287772 protein_coding
ENSMUST00000131409 (Slc35c2-016) 165280879-165287827 protein_coding
ENSMUST00000132270 (Slc35c2-004) 165276554-165287824 nonsense_mediated_decay
ENSMUST00000133961 (Slc35c2-009) 165280786-165287836 protein_coding
ENSMUST00000145301 (Slc35c2-006) 165278390-165283600 nonsense_mediated_decay
ENSMUST00000147247 (Slc35c2-011) 165281549-165287838 retained_intron
ENSMUST00000154608 (Slc35c2-007) 165277452-165282223 retained_intron
ENSMUST00000155289 (Slc35c2-003) 165280617-165283600 protein_coding
ENSMUST00000156134 (Slc35c2-010) 165280786-165287835 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G4_0001ENSG00000062598ENST00000290246ENST00000352077ENST00000372176ENST00000396391ENST00000425546ENST00000450812ENST00000452857ENST00000460474ENST00000462491ENST00000462593ENST00000464448ENST00000467800ENST00000469801ENST00000480042ENST00000481852ENST00000487583ENST00000488853ENST00000497412ENSG00000080189ENST00000243896ENST00000317734ENST00000372227ENST00000372230ENST00000420518ENST00000424568ENST00000480329ENST00000481809ENST00000484188ENST00000484318ENST00000487729ENST00000493599ENST00000543605ENSG00000215452ENST00000400371ENST00000472805CIL_0006G4_0002ENSMUSG00000017664ENSMUST00000017808ENSMUST00000109298ENSMUST00000109299ENSMUST00000109300ENSMUST00000125550ENSMUST00000129210ENSMUST00000129336ENSMUST00000130393ENSMUST00000131409ENSMUST00000132270ENSMUST00000133961ENSMUST00000145301ENSMUST00000147247ENSMUST00000154608ENSMUST00000155289ENSMUST00000156134
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G4_0001ENSG00000062598ENST00000290246ENST00000352077ENST00000372176ENST00000396391ENST00000425546ENST00000452857ENST00000462491ENST00000462593ENST00000467800ENST00000480042ENST00000488853ENSG00000080189ENST00000243896ENST00000317734ENST00000372227ENST00000372230ENST00000424568ENST00000480329ENST00000484318ENST00000487729ENST00000493599ENST00000543605ENSG00000215452ENST00000400371ENST00000472805CIL_0006G4_0002ENSMUSG00000017664ENSMUST00000017808ENSMUST00000109298ENSMUST00000109299ENSMUST00000109300ENSMUST00000125550ENSMUST00000129210ENSMUST00000133961ENSMUST00000147247ENSMUST00000154608ENSMUST00000156134
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000062598 ENST00000290246 2.296±0.00 N/A N/A 3.476±0.00 N/A N/A 3.902±0.00 1.489±0.00 0.674±0.00 N/A 1.775±0.00 2.753±1.70 2.767±0.46 6.295±0.98
ENST00000352077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.821±0.00 N/A
ENST00000372176 1.657±0.00 N/A N/A 3.033±0.00 N/A 0.603±0.00 N/A N/A N/A 1.179±0.00 N/A 1.420±0.00 N/A N/A
ENST00000396391 N/A 2.008±0.00 N/A 3.037±0.00 N/A 2.337±0.00 2.355±0.00 3.296±0.00 N/A 2.506±0.00 N/A 4.122±0.37 3.195±0.23 6.699±3.33
ENST00000425546 N/A N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A N/A
ENST00000450812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452857 2.237±0.00 6.192±0.00 N/A 4.335±1.65 2.133±0.50 2.603±1.53 N/A 2.936±2.29 2.181±0.00 2.912±0.00 3.096±2.45 4.890±2.83 2.531±0.52 10.822±0.00
ENST00000460474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462491 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.422±0.00 N/A N/A N/A N/A
ENST00000462593 N/A N/A N/A N/A N/A N/A N/A 1.346±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467800 N/A N/A N/A N/A N/A 0.596±0.00 N/A N/A 1.163±0.00 0.748±0.30 N/A 0.462±0.00 N/A N/A
ENST00000469801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480042 N/A N/A 2.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488853 N/A N/A N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000080189 ENST00000243896 N/A N/A N/A 2.045±0.00 3.615±0.00 N/A N/A N/A N/A N/A N/A 5.317±0.00 3.736±0.00 N/A
ENST00000317734 8.025±0.00 6.449±0.00 N/A 2.069±0.67 N/A N/A N/A 6.027±2.49 N/A N/A 2.023±1.70 6.424±5.07 6.624±0.00 7.466±0.27
ENST00000372227 N/A 3.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372230 N/A 4.972±0.00 N/A 2.011±0.06 5.051±1.63 3.359±1.33 1.634±1.23 4.639±0.00 4.653±3.16 6.923±0.00 N/A 9.992±6.12 13.568±2.82 4.141±0.36
ENST00000420518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A N/A N/A
ENST00000480329 N/A N/A N/A N/A N/A N/A N/A N/A 6.673±0.00 N/A 0.688±0.00 6.750±4.91 N/A N/A
ENST00000481809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484318 8.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.898±0.00 1.178±0.00 N/A N/A N/A
ENST00000487729 N/A N/A N/A N/A N/A N/A 5.220±0.00 N/A N/A 8.898±0.00 3.995±0.00 N/A 15.191±0.00 12.752±0.69
ENST00000493599 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.803±0.00 N/A N/A N/A N/A
ENST00000543605 N/A N/A 0.196±0.00 N/A 0.479±0.00 0.298±0.08 N/A N/A N/A N/A 0.624±0.00 1.051±0.00 N/A N/A
ENSG00000215452 ENST00000400371 N/A 0.027±0.00 0.142±0.00 0.126±0.00 0.026±0.00 N/A N/A 0.026±0.00 N/A 0.040±0.00 N/A 0.050±0.01 0.063±0.00 0.061±0.00
ENST00000472805 0.006±0.00 0.089±0.00 N/A 0.073±0.02 N/A 0.172±0.11 N/A 0.037±0.00 0.132±0.00 N/A N/A 0.067±0.04 N/A 0.116±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017664 ENSMUST00000017808 5.210±0.00 N/A 5.012±0.00 2.937±0.00 6.423±0.00 2.691±0.00 4.661±2.77 7.512±3.41 5.021±0.77 5.353±1.83 N/A 5.306±3.07 5.934±0.56 5.920±2.46
ENSMUST00000109298 6.559±0.17 9.541±2.88 N/A 1.272±0.00 N/A 4.683±0.67 N/A N/A 3.741±0.61 3.781±0.00 N/A 3.216±1.01 5.044±2.86 N/A
ENSMUST00000109299 N/A N/A N/A 6.431±0.00 N/A N/A 1.588±0.00 N/A N/A N/A N/A 4.797±2.28 6.367±5.54 N/A
ENSMUST00000109300 10.588±0.57 18.675±2.79 9.168±0.55 10.801±2.04 14.819±7.34 9.076±1.79 4.623±0.40 9.504±0.99 9.737±3.65 8.535±0.75 4.510±1.35 10.869±1.90 11.639±1.08 8.856±1.15
ENSMUST00000125550 N/A N/A N/A 4.318±0.00 N/A N/A N/A N/A N/A N/A N/A 6.613±0.00 N/A N/A
ENSMUST00000129210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.842±0.00 N/A N/A
ENSMUST00000129336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133961 N/A 19.297±2.72 N/A N/A 14.119±1.85 8.212±1.51 N/A 7.196±0.59 6.205±0.56 8.855±1.56 N/A 14.813±0.00 N/A 8.116±0.43
ENSMUST00000145301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147247 N/A N/A N/A N/A 1.359±0.00 N/A N/A N/A N/A N/A N/A 3.193±1.68 N/A N/A
ENSMUST00000154608 N/A N/A N/A N/A 8.469±0.00 N/A N/A N/A N/A N/A N/A 5.120±0.77 N/A N/A
ENSMUST00000155289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156134 N/A N/A N/A N/A N/A 11.128±1.25 N/A N/A 18.770±0.00 N/A N/A 11.236±1.24 N/A 8.220±0.26

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