C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: occludin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396442 OCLN-002 ENSG00000197822 9606 + 5:69492790-69553671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryENST00000396442
Transcript ID Brain Breast Colon Kidney Liver Ovary
ENST00000396442 0.299±0.00 1.370±0.00 1.554±0.00 3.444±0.00 1.512±0.00 2.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000774 CIL_000774_0002 CGP 5:69415112-69558104
CIL_0005K7 CIL_0005K7_0002 CGP 5:69492292-69594723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005923 IDA:IEA tight junction
GO:0006461 TAS protein complex assembly
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019904 IPI protein domain specific binding
GO:0030054 IDA cell junction
GO:0031410 IDA cytoplasmic vesicle
GO:0045216 IMP cell-cell junction organization
GO:0070830 IMP tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160859 Ocln-002 protein_coding Mus_musculus 0 1711
ENSMUST00000022140 Ocln-003 protein_coding Mus_musculus 0 1711
ENSMUST00000069756 Ocln-001 protein_coding Mus_musculus 0 1711
ENSMUST00000159459 Ocln-004 protein_coding Mus_musculus 0 920
ENSMUST00000159515 Ocln-005 protein_coding Mus_musculus 0 420

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