C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396642 PDE7A-004 ENSG00000205268 9606 - 8:65721798-65841508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungOvaryENST00000396642
Transcript ID Brain Breast Colon Heart Liver Lung Ovary
ENST00000396642 0.917±0.00 2.014±0.00 2.452±0.00 1.739±0.00 2.768±0.00 4.766±0.00 1.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LS CIL_0005LS_0002 CGP 8:65602456-65771261
CIL_0005LR CIL_0005LR_0002 CGP 8:65644734-65842322
CIL_0007EF CIL_0007EF_0002 CGP 8:65717510-66100526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 TAS 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099195 Pde7a-001 protein_coding Mus_musculus 0 1657
ENSMUST00000091314 Pde7a-002 protein_coding Mus_musculus 0 1448
ENSMUST00000149081 Pde7a-007 nonsense_mediated_decay Mus_musculus 0 809
ENSMUST00000148590 Pde7a-010 retained_intron Mus_musculus 0 636
ENSMUST00000156652 Pde7a-003 nonsense_mediated_decay Mus_musculus 0 555
ENSMUST00000139426 Pde7a-008 processed_transcript Mus_musculus 0 523
ENSMUST00000129060 Pde7a-004 retained_intron Mus_musculus 0 407
ENSMUST00000121951 Pde7a-006 protein_coding Mus_musculus 0 198
ENSMUST00000143120 Pde7a-005 processed_transcript Mus_musculus 3.00018e-42 178

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