C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubinuclein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396658 UBN1-002 ENSG00000118900 9606 + 16:4852215-4882360 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungENST00000396658
Transcript ID Bladder Liver Lung
ENST00000396658 1.186±0.00 0.943±0.00 2.682±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G7 CIL_0001G7_0001 CGP 16:4796968-4847342
CIL_00004T CIL_00004T_0001 CGP 16:4803203-4882360
CIL_0001FC CIL_0001FC_0001 CGP 16:4846665-4960741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0005923 ISS tight junction
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016032 IEA viral process
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052449 Ubn1-201 protein_coding Mus_musculus 0 4045

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