C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396827 ZSCAN12-201 ENSG00000158691 9606 - 6:28379219-28399731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396827 0.443±0.00 0.414±0.00 0.523±0.00 1.398±0.00 0.485±0.00 0.680±0.12 0.347±0.00 0.825±0.00 0.203±0.07 0.451±0.18 0.088±0.04 0.722±0.26 0.493±0.23 1.648±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 0 383
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 0 383
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 2e-40 172
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 2e-40 172
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 2e-40 172
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 7e-35 154
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 7e-35 154
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 7e-35 154
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 1e-31 143
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 7e-30 137
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 7e-30 137
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 1e-21 110
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 9e-19 100
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 0.00000000005 75
ENSMUST00000051667 Zfp105-001 protein_coding Mus_musculus 0.000005 58
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 0.000005 58
ENSDART00000152178 protein_coding Danio_rerio 0.0003 53

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