C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 3, ERATO Doi 254, expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165956 D3Ertd254e-201 ENSMUSG00000033883 10090 + 3:36159522-36170335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165956
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165956 1.235±0.48 0.718±0.10 0.243±0.00 1.077±0.16 0.733±0.11 0.538±0.05 0.723±0.10 0.544±0.08 0.971±0.42 0.317±0.04 1.261±0.44 0.906±0.00 0.260±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0002 VISTA 3:35858852-36462657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000135500 si:dkey-4c15.6-201 protein_coding Danio_rerio 0.00000000009 75
ENSDART00000141993 si:dkey-4c15.6-004 protein_coding Danio_rerio 0.00000000009 75
ENSDART00000130643 CABZ01069020.1-201 protein_coding Danio_rerio 0.0000000003 73
ENSDART00000111603 zgc:174697-001 protein_coding Danio_rerio 0.0001 55
ENSDART00000123893 BX248128.5-201 protein_coding Danio_rerio 0.0004 53
ENSDART00000113768 zgc:174696-202 protein_coding Danio_rerio 0.0004 53
ENSDART00000108582 zgc:174696-201 protein_coding Danio_rerio 0.0004 53
ENSDART00000143145 BX323023.1-201 protein_coding Danio_rerio 0.0004 53
ENST00000268655 ZNF174-001 protein_coding Homo_sapiens 0.0000002 62
ENST00000299667 ZNF3-001 protein_coding Homo_sapiens 1e-16 94
ENST00000301318 ZFP28-001 protein_coding Homo_sapiens 0.000002 60
ENST00000303915 ZNF3-201 protein_coding Homo_sapiens 1e-16 94
ENST00000305127 ZNF182-201 protein_coding Homo_sapiens 0.0000000006 71
ENST00000311048 ZNF431-001 protein_coding Homo_sapiens 2e-19 104
ENST00000316491 ZNF720-001 protein_coding Homo_sapiens 5e-30 137
ENST00000333206 ZSCAN30-002 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000343280 ZNF772-001 protein_coding Homo_sapiens 0.000000004 69
ENST00000343769 ZNF93-001 protein_coding Homo_sapiens 1e-31 143
ENST00000356584 ZNF772-003 protein_coding Homo_sapiens 0.000000001 69
ENST00000357774 ZNF98-001 protein_coding Homo_sapiens 0 296
ENST00000358491 ZNF429-003 protein_coding Homo_sapiens 4e-30 137
ENST00000361028 ZSCAN12-001 protein_coding Homo_sapiens 0.00000000008 75
ENST00000376943 ZNF182-001 protein_coding Homo_sapiens 0.0000000006 71
ENST00000389534 ZNF841-201 protein_coding Homo_sapiens 2e-30 139
ENST00000395375 ZNF273-007 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000395824 ZNF287-002 protein_coding Homo_sapiens 3e-28 132
ENST00000395825 ZNF287-001 protein_coding Homo_sapiens 3e-28 132
ENST00000396827 ZSCAN12-201 protein_coding Homo_sapiens 0.00000000005 75
ENST00000396965 ZNF182-002 protein_coding Homo_sapiens 0.0000000006 71
ENST00000397126 ZNF208-001 protein_coding Homo_sapiens 3e-34 152
ENST00000398707 ZNF720-011 nonsense_mediated_decay Homo_sapiens 4e-30 137
ENST00000402377 ZNF681-001 protein_coding Homo_sapiens 1e-34 154
ENST00000419098 ZNF732-001 protein_coding Homo_sapiens 8e-17 94
ENST00000420878 ZSCAN30-001 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000424697 ZNF3-202 protein_coding Homo_sapiens 1e-16 94
ENST00000425074 ZNF772-004 protein_coding Homo_sapiens 0.000000001 69
ENST00000426391 ZNF841-001 protein_coding Homo_sapiens 2e-30 139
ENST00000427512 ZNF772-002 protein_coding Homo_sapiens 0.000000003 69
ENST00000436261 ZNF852-001 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000439134 RP11-182N22.7-001 processed_pseudogene Homo_sapiens 9.94922e-44 182
ENST00000456783 ZNF492-001 protein_coding Homo_sapiens 0 207
ENST00000463067 ZNF852-003 retained_intron Homo_sapiens 0.000000000001 81
ENST00000476120 ZNF273-001 protein_coding Homo_sapiens 0 230
ENST00000487620 ZNF3-002 retained_intron Homo_sapiens 1e-16 94
ENST00000489411 ZNF852-002 processed_transcript Homo_sapiens 0.0000000000004 81
ENST00000491624 RP11-286H14.1-001 processed_pseudogene Homo_sapiens 5e-32 141
ENST00000527278 ZNF273-002 processed_transcript Homo_sapiens 0 230
ENST00000528059 ZNF681-003 protein_coding Homo_sapiens 2e-17 94
ENST00000529515 ZNF720-008 protein_coding Homo_sapiens 9e-31 137
ENST00000529943 ZNF720-010 nonsense_mediated_decay Homo_sapiens 2e-30 137
ENST00000530881 ZNF720-006 protein_coding Homo_sapiens 1e-30 137
ENST00000531570 ZNF681-002 protein_coding Homo_sapiens 0.000000000007 75
ENST00000534277 ZNF720-002 nonsense_mediated_decay Homo_sapiens 1e-29 137
ENST00000571936 ZNF174-005 protein_coding Homo_sapiens 0.0000002 62
ENST00000590777 ZSCAN30-012 retained_intron Homo_sapiens 0.00000000000001 86
ENST00000594295 ZNF841-002 protein_coding Homo_sapiens 2e-30 139
ENST00000600692 ZNF431-004 protein_coding Homo_sapiens 3e-20 104
ENST00000609966 ZNF208-201 protein_coding Homo_sapiens 0 250
ENST00000610548 ZNF772-201 protein_coding Homo_sapiens 0.000000001 69
ENST00000610712 ZSCAN30-201 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000615214 ZNF772-202 protein_coding Homo_sapiens 0.000000001 69
ENST00000616809 ZNF852-201 protein_coding Homo_sapiens 0.000000000000003 88
ENST00000617616 RP11-797H7.6-001 unprocessed_pseudogene Homo_sapiens 0.000000000000001 86
ENST00000618549 ZNF429-201 protein_coding Homo_sapiens 7e-17 94
ENST00000619749 ZNF732-201 protein_coding Homo_sapiens 8e-17 94
ENST00000623416 AC011477.2-201 pseudogene Homo_sapiens 0.00000000000007 82

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