C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003F9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100884-ENSG00000129535 CGP 9606 14:24070837-24115014
GeneTranscriptPositionBiotype
ENSG00000100884 (CPNE6)
copine VI (neuronal) 		ENST00000397016 (CPNE6-003) 24070837-24078100 protein_coding
ENST00000460657 (CPNE6-002) 24071589-24078086 retained_intron
ENST00000537691 (CPNE6-201) 24070837-24078098 protein_coding
ENST00000557829 (CPNE6-006) 24075558-24078087 retained_intron
ENST00000557889 (CPNE6-017) 24071187-24073094 protein_coding
ENST00000558450 (CPNE6-014) 24070897-24074095 protein_coding
ENST00000558541 (CPNE6-018) 24071360-24075177 protein_coding
ENST00000558795 (CPNE6-005) 24071562-24075511 nonsense_mediated_decay
ENST00000558859 (CPNE6-011) 24071522-24074726 protein_coding
ENST00000558995 (CPNE6-004) 24070949-24078086 retained_intron
ENST00000559197 (CPNE6-019) 24071532-24074311 protein_coding
ENST00000559207 (CPNE6-013) 24071581-24075584 protein_coding
ENST00000559778 (CPNE6-016) 24071017-24073647 protein_coding
ENST00000560092 (CPNE6-008) 24071525-24074301 processed_transcript
ENST00000560356 (CPNE6-015) 24070848-24074125 protein_coding
ENST00000560761 (CPNE6-010) 24071090-24074314 protein_coding
ENST00000560828 (CPNE6-009) 24071532-24074582 protein_coding
ENST00000560845 (CPNE6-007) 24075831-24076840 retained_intron
ENST00000560884 (CPNE6-012) 24071550-24074311 protein_coding
ENSG00000100889 (PCK2)
phosphoenolpyruvate carboxykinase 2 (mitochondrial) 		ENST00000216780 (PCK2-002) 24094138-24104130 protein_coding
ENST00000396973 (PCK2-001) 24094159-24100562 protein_coding
ENST00000545054 (PCK2-008) 24094301-24104030 protein_coding
ENST00000557969 (PCK2-010) 24102675-24103722 retained_intron
ENST00000558096 (PCK2-007) 24094377-24104130 protein_coding
ENST00000558674 (PCK2-006) 24094313-24100303 retained_intron
ENST00000559171 (PCK2-009) 24100149-24110598 protein_coding
ENST00000559250 (PCK2-003) 24094053-24104125 protein_coding
ENST00000559503 (PCK2-011) 24098512-24102830 nonsense_mediated_decay
ENST00000559584 (PCK2-015) 24094357-24098228 nonsense_mediated_decay
ENST00000559837 (PCK2-013) 24094194-24099108 protein_coding
ENST00000560106 (PCK2-014) 24094281-24098591 nonsense_mediated_decay
ENST00000560657 (PCK2-016) 24094350-24097063 processed_transcript
ENST00000560736 (PCK2-012) 24094150-24099125 protein_coding
ENST00000561050 (PCK2-004) 24094311-24100243 retained_intron
ENST00000561286 (PCK2-005) 24094311-24104124 protein_coding
ENSG00000100897 (DCAF11)
DDB1 and CUL4 associated factor 11 		ENST00000326009 (DCAF11-008) 24115275-24124029 nonsense_mediated_decay
ENST00000396936 (DCAF11-002) 24115374-24123981 protein_coding
ENST00000396941 (DCAF11-003) 24115326-24124029 protein_coding
ENST00000446197 (DCAF11-001) 24114780-24125240 protein_coding
ENST00000557802 (DCAF11-004) 24114791-24125242 nonsense_mediated_decay
ENST00000557809 (DCAF11-029) 24114777-24117345 processed_transcript
ENST00000557810 (DCAF11-031) 24114777-24117349 protein_coding
ENST00000557888 (DCAF11-037) 24115315-24117701 nonsense_mediated_decay
ENST00000557952 (DCAF11-017) 24115275-24117044 processed_transcript
ENST00000558215 (DCAF11-027) 24114777-24116981 protein_coding
ENST00000558408 (DCAF11-036) 24115283-24117041 protein_coding
ENST00000558624 (DCAF11-006) 24118543-24124030 retained_intron
ENST00000558638 (DCAF11-034) 24115225-24118105 protein_coding
ENST00000558706 (DCAF11-016) 24115188-24117706 nonsense_mediated_decay
ENST00000558914 (DCAF11-007) 24115326-24123796 nonsense_mediated_decay
ENST00000559017 (DCAF11-028) 24114195-24117306 protein_coding
ENST00000559115 (DCAF11-005) 24114627-24124029 protein_coding
ENST00000559144 (DCAF11-010) 24119146-24123362 protein_coding
ENST00000559288 (DCAF11-020) 24115246-24117351 protein_coding
ENST00000559354 (DCAF11-021) 24115318-24117330 protein_coding
ENST00000559382 (DCAF11-025) 24114812-24117393 protein_coding
ENST00000559396 (DCAF11-033) 24115176-24115685 protein_coding
ENST00000559451 (DCAF11-015) 24115328-24118098 nonsense_mediated_decay
ENST00000559472 (DCAF11-011) 24120959-24122174 retained_intron
ENST00000559593 (DCAF11-030) 24115326-24117684 protein_coding
ENST00000559796 (DCAF11-035) 24114802-24116986 protein_coding
ENST00000560046 (DCAF11-012) 24117334-24119402 retained_intron
ENST00000560171 (DCAF11-013) 24115208-24118523 processed_transcript
ENST00000560457 (DCAF11-032) 24115186-24117686 nonsense_mediated_decay
ENST00000560459 (DCAF11-023) 24115326-24117355 protein_coding
ENST00000560614 (DCAF11-014) 24115209-24118116 nonsense_mediated_decay
ENST00000560713 (DCAF11-024) 24114810-24117682 protein_coding
ENST00000560901 (DCAF11-018) 24114810-24118134 protein_coding
ENST00000561001 (DCAF11-019) 24114861-24117718 protein_coding
ENST00000561016 (DCAF11-039) 24115207-24117409 processed_transcript
ENST00000561041 (DCAF11-038) 24115238-24117718 protein_coding
ENST00000561056 (DCAF11-026) 24114627-24117011 processed_transcript
ENST00000561375 (DCAF11-022) 24114777-24118436 protein_coding
CIL_0003F9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022212-ENSMUSG00000040632 CGP 10090 14:55510445-55524981
GeneTranscriptPositionBiotype
ENSMUSG00000022212 (Cpne6)
copine VI 		ENSMUST00000074225 (Cpne6-001) 55510448-55517431 protein_coding
ENSMUST00000163767 (Cpne6-005) 55511360-55517431 protein_coding
ENSMUST00000165262 (Cpne6-003) 55510445-55517431 protein_coding
ENSMUST00000165725 (Cpne6-006) 55510597-55513692 nonsense_mediated_decay
ENSMUST00000169869 (Cpne6-004) 55511311-55517431 retained_intron
ENSMUST00000170155 (Cpne6-002) 55510475-55517430 retained_intron
ENSMUST00000171643 (Cpne6-007) 55511985-55517429 protein_coding
ENSMUSG00000040632 (Nrl)
neural retina leucine zipper gene 		ENSMUST00000062232 (Nrl-201) 55519528-55524981 protein_coding
ENSMUST00000111404 (Nrl-202) 55518978-55524191 protein_coding
ENSMUST00000178694 (Nrl-203) 55519528-55524965 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003F9_0001ENSG00000100884ENST00000397016ENST00000460657ENST00000537691ENST00000557829ENST00000557889ENST00000558450ENST00000558541ENST00000558795ENST00000558859ENST00000558995ENST00000559197ENST00000559207ENST00000559778ENST00000560092ENST00000560356ENST00000560761ENST00000560828ENST00000560845ENST00000560884ENSG00000100889ENST00000216780ENST00000396973ENST00000545054ENST00000557969ENST00000558096ENST00000558674ENST00000559171ENST00000559250ENST00000559503ENST00000559584ENST00000559837ENST00000560106ENST00000560657ENST00000560736ENST00000561050ENST00000561286ENSG00000100897ENST00000326009ENST00000396936ENST00000396941ENST00000446197ENST00000557802ENST00000557809ENST00000557810ENST00000557888ENST00000557952ENST00000558215ENST00000558408ENST00000558624ENST00000558638ENST00000558706ENST00000558914ENST00000559017ENST00000559115ENST00000559144ENST00000559288ENST00000559354ENST00000559382ENST00000559396ENST00000559451ENST00000559472ENST00000559593ENST00000559796ENST00000560046ENST00000560171ENST00000560457ENST00000560459ENST00000560614ENST00000560713ENST00000560901ENST00000561001ENST00000561016ENST00000561041ENST00000561056ENST00000561375CIL_0003F9_0002ENSMUSG00000022212ENSMUST00000074225ENSMUST00000163767ENSMUST00000165262ENSMUST00000165725ENSMUST00000169869ENSMUST00000170155ENSMUST00000171643ENSMUSG00000040632ENSMUST00000062232ENSMUST00000111404ENSMUST00000178694
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100884 ENST00000397016 N/A N/A N/A 4.655±0.00 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.018±0.00 N/A
ENST00000460657 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.451±0.00 N/A N/A N/A N/A N/A N/A
ENST00000537691 N/A N/A N/A 27.396±0.00 N/A N/A N/A 1.719±0.00 N/A N/A N/A 0.059±0.00 0.018±0.00 N/A
ENST00000557829 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.044±0.00 N/A 0.197±0.00
ENST00000557889 N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558450 N/A N/A N/A N/A N/A N/A N/A 0.628±0.00 0.442±0.00 N/A N/A N/A N/A N/A
ENST00000558541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558795 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A
ENST00000558859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A
ENST00000558995 N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 0.089±0.00 N/A N/A N/A N/A N/A
ENST00000559197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559207 N/A 0.034±0.00 1.212±0.00 N/A N/A 0.155±0.00 N/A 1.027±0.00 N/A N/A N/A N/A N/A 0.204±0.00
ENST00000559778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560092 N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A 0.579±0.00 N/A 0.149±0.00 N/A N/A N/A
ENST00000560356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560845 0.276±0.00 N/A N/A N/A N/A N/A 0.152±0.00 N/A 0.343±0.22 N/A N/A N/A 0.069±0.00 N/A
ENST00000560884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100889 ENST00000216780 9.240±0.00 N/A 25.945±0.00 N/A 2.782±1.14 4.009±1.12 0.521±0.00 51.803±43.56 47.027±0.00 2.301±0.00 1.738±0.00 2.469±1.23 2.510±1.50 N/A
ENST00000396973 N/A N/A N/A N/A N/A N/A 0.283±0.23 N/A N/A 0.793±0.00 N/A 1.764±0.00 N/A N/A
ENST00000545054 5.730±0.00 N/A N/A 1.889±0.00 2.205±0.00 1.574±0.00 N/A 18.472±0.00 0.771±0.00 2.330±0.00 N/A 5.919±4.27 3.149±0.00 8.696±6.29
ENST00000557969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.142±0.00 N/A
ENST00000558674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559250 N/A 4.194±0.00 N/A 0.402±0.00 N/A N/A 0.309±0.00 N/A N/A 1.183±0.00 N/A N/A N/A N/A
ENST00000559503 N/A N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A N/A 1.101±0.00 N/A N/A N/A
ENST00000559584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559837 N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A 0.897±0.00 N/A N/A 1.292±0.00 N/A N/A
ENST00000560106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 N/A N/A
ENST00000561050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561286 15.565±0.00 4.891±0.00 N/A 0.898±0.00 4.037±1.68 5.251±0.00 0.531±0.35 28.712±0.00 49.892±0.00 3.595±0.00 N/A 3.300±1.05 N/A 5.872±0.00
ENSG00000100897 ENST00000326009 N/A N/A N/A 6.464±0.38 4.787±0.00 N/A 8.593±0.00 N/A 19.951±0.00 9.429±0.00 9.757±0.05 N/A 7.745±1.59 N/A
ENST00000396936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.462±0.81 5.169±0.00 8.196±0.00
ENST00000396941 3.778±0.00 7.250±0.00 N/A 4.271±0.00 N/A 5.908±0.00 4.124±0.00 24.534±12.11 35.352±0.00 N/A N/A N/A 4.769±0.00 6.482±0.00
ENST00000446197 3.065±0.00 3.209±0.00 3.342±0.00 4.370±1.03 N/A 4.524±1.10 2.780±1.24 11.911±1.07 11.544±8.90 2.489±1.04 N/A 6.546±3.88 4.141±0.75 6.566±0.00
ENST00000557802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557952 N/A N/A 21.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558408 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.833±0.00 N/A N/A N/A N/A
ENST00000558624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558914 2.948±0.00 N/A 4.639±0.00 N/A 6.318±0.00 6.788±0.00 N/A N/A N/A 6.045±0.00 N/A 6.496±0.00 3.875±0.00 N/A
ENST00000559017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559115 3.019±0.00 6.691±0.00 N/A N/A 5.272±0.00 N/A 8.009±0.00 12.168±0.00 3.261±0.00 4.133±0.00 6.928±0.00 6.521±2.22 N/A 6.548±0.13
ENST00000559144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559354 N/A N/A N/A N/A N/A N/A N/A 73.482±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022212 ENSMUST00000074225 N/A N/A 0.278±0.05 0.650±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163767 N/A N/A 0.600±0.00 19.571±26.90 0.028±0.00 0.058±0.00 0.020±0.00 N/A 0.040±0.01 0.004±0.00 0.037±0.01 0.138±0.05 N/A 0.041±0.03
ENSMUST00000165262 N/A N/A N/A 14.217±0.00 N/A 0.106±0.05 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A
ENSMUST00000165725 N/A 0.065±0.01 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A 0.022±0.00 0.018±0.00
ENSMUST00000169869 0.036±0.02 N/A 0.212±0.00 N/A 0.023±0.00 0.113±0.06 N/A 0.038±0.00 0.044±0.03 N/A 0.052±0.00 0.047±0.00 0.004±0.00 N/A
ENSMUST00000170155 0.020±0.01 0.030±0.02 0.200±0.00 3.255±3.63 0.005±0.00 0.022±0.01 0.012±0.00 0.031±0.00 0.006±0.00 0.010±0.00 0.033±0.02 0.039±0.03 N/A 0.057±0.04
ENSMUST00000171643 0.076±0.00 0.148±0.06 N/A 0.597±0.19 0.021±0.01 0.074±0.05 0.063±0.03 0.058±0.01 0.021±0.01 0.026±0.01 N/A 0.089±0.03 N/A N/A
ENSMUSG00000040632 ENSMUST00000062232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENSMUST00000111404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178694 0.018±0.00 N/A N/A 0.113±0.13 N/A N/A N/A N/A 0.013±0.01 N/A 0.034±0.00 0.102±0.06 0.006±0.00 0.084±0.02

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