C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein L, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397278 APOL1-001 ENSG00000100342 9606 + 22:36253010-36267525 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000397278
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000397278 0.799±0.00 1.991±0.00 0.781±0.00 0.243±0.00 6.045±2.84 7.735±5.85 10.834±9.01 8.908±5.45 28.542±2.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0003 CGP 22:36226203-36267530
CIL_0003GV CIL_0003GV_0001 CGP 22:36253010-36388018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IDA chloride channel activity
GO:0005515 IPI protein binding
GO:0005576 IEA:TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006821 IDA chloride transport
GO:0006869 IEA lipid transport
GO:0008203 IEA cholesterol metabolic process
GO:0008289 IEA:IDA lipid binding
GO:0019835 IDA cytolysis
GO:0031224 IC intrinsic component of membrane
GO:0031640 IDA killing of cells of other organism
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034364 IDA high-density lipoprotein particle
GO:0042157 IEA lipoprotein metabolic process
GO:0045087 IDA innate immune response
GO:0072562 IDA blood microparticle
GO:1902476 IDA chloride transmembrane transport

Homologs

No Homologs available.

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