C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397642 RP11-488L18.1-001 ENSG00000214144 9606 + 1:247229940-247231880 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyOvaryTestisENST00000397642
Transcript ID Breast Kidney Ovary Testis
ENST00000397642 0.013±0.00 0.032±0.00 0.009±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 2054
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 2049
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 1825
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 1700
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 1565
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 1380
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 970
ENSMUST00000118350 Gm15604-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 815
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 743
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 560
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 403
ENSMUST00000133964 Hspa8-005 protein_coding Mus_musculus 0 363
ENSMUST00000121183 Gm13854-001 processed_pseudogene Mus_musculus 0 246

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