C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 19 open reading frame 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397820 C19orf38-001 ENSG00000214212 9606 + 19:10848402-10869790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397820
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397820 4.478±0.00 1.304±0.00 0.472±0.00 1.109±0.00 0.330±0.00 0.200±0.07 0.844±0.00 0.475±0.42 1.999±1.68 1.125±0.00 0.704±0.56 2.621±1.34 5.038±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SD CIL_0002SD_0001 CGP 19:10832438-10869790
CIL_0002S5 CIL_0002S5_0001 CGP 19:10836575-10923070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076326 AB124611-003 nonsense_mediated_decay Mus_musculus 5e-17 94
ENSMUST00000173769 AB124611-002 protein_coding Mus_musculus 5e-17 94
ENSMUST00000086361 AB124611-001 protein_coding Mus_musculus 5e-17 94

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