C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin basic protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397860 MBP-005 ENSG00000197971 9606 - 18:77012779-77132769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397860
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397860 3.874±0.00 6.279±0.00 4.151±0.00 3.128±1.12 5.747±0.47 2.943±1.57 5.522±4.31 3.494±0.22 7.380±0.61 5.264±2.80 4.836±1.43 1.323±0.09 2.657±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000017 CIL_000017_0002 CGP 18:76822607-77133683

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006955 TAS immune response
GO:0007268 TAS synaptic transmission
GO:0007417 TAS central nervous system development
GO:0007568 IEA aging
GO:0008366 TAS axon ensheathment
GO:0009636 IEA response to toxic substance
GO:0019911 IEA structural constituent of myelin sheath
GO:0021762 IEP substantia nigra development
GO:0032570 IEA response to progesterone
GO:0033269 IEA internode region of axon
GO:0034612 IEA response to tumor necrosis factor
GO:0042552 IEA myelination
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0043209 IEA myelin sheath
GO:0043218 IEA compact myelin
GO:0046689 IEA response to mercury ion
GO:0050771 IEA negative regulation of axonogenesis
GO:0061024 IEA membrane organization
GO:0070542 IEA response to fatty acid
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091789 Mbp-003 protein_coding Mus_musculus 0 697
ENSMUST00000047865 Mbp-001 protein_coding Mus_musculus 0 673
ENSMUST00000080658 Mbp-203 protein_coding Mus_musculus 0 425
ENSMUST00000062446 Mbp-201 protein_coding Mus_musculus 0 425
ENSMUST00000075372 Mbp-202 protein_coding Mus_musculus 0 424
ENSMUST00000102812 Mbp-204 protein_coding Mus_musculus 0 424
ENSMUST00000152071 Mbp-005 protein_coding Mus_musculus 0 412
ENSMUST00000114674 Mbp-205 protein_coding Mus_musculus 0 348
ENSMUST00000142850 Mbp-007 protein_coding Mus_musculus 0 344
ENSMUST00000133193 Mbp-010 protein_coding Mus_musculus 0 335
ENSMUST00000123251 Mbp-008 protein_coding Mus_musculus 0 315
ENSMUST00000153478 Mbp-006 protein_coding Mus_musculus 0 298
ENSMUST00000132369 Mbp-011 protein_coding Mus_musculus 0 268

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