C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000017_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000095890-ENSDARG00000089413 CGP 7955 16:7964346-8063371
GeneTranscriptPositionBiotype
ENSDARG00000089413 (mbpb)
myelin basic protein b 		ENSDART00000130081 (mbpb-201) 8034039-8055987 protein_coding
ENSDART00000149070 (mbpb-004) 8017060-8035517 protein_coding
ENSDART00000149206 (mbpb-002) 8034038-8063344 protein_coding
ENSDART00000149570 (mbpb-003) 8017135-8035518 protein_coding
ENSDART00000149669 (mbpb-005) 8016932-8035265 processed_transcript
ENSDART00000149778 (mbpb-001) 8034038-8063371 protein_coding
ENSDARG00000095869 (si:ch211-198o19.2)
si:ch211-198o19.2 		ENSDART00000149614 (si:ch211-198o19.2-001) 8042142-8043225 processed_transcript
ENSDARG00000095890 (znf236)
zinc finger protein 236 		ENSDART00000149720 (znf236-001) 7964346-8014222 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000017_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130856-ENSG00000197971 CGP 9606 18:76822607-77133683
GeneTranscriptPositionBiotype
ENSG00000130856 (ZNF236)
zinc finger protein 236 		ENST00000253159 (ZNF236-001) 76824160-76970727 protein_coding
ENST00000320610 (ZNF236-002) 76822607-76969918 protein_coding
ENST00000543926 (ZNF236-003) 76824160-76970727 nonsense_mediated_decay
ENST00000579322 (ZNF236-004) 76849199-76881482 protein_coding
ENST00000583095 (ZNF236-005) 76851773-76875516 processed_transcript
ENST00000583488 (ZNF236-008) 76880282-76895377 retained_intron
ENST00000584565 (ZNF236-006) 76898092-76899123 processed_transcript
ENSG00000244229 (RPL26P35)
ribosomal protein L26 pseudogene 35 		ENST00000481064 (RPL26P35-001) 76834429-76834888 processed_pseudogene
ENSG00000265261 (RP11-162A12.3)
 ENST00000583058 (RP11-162A12.3-001) 76884935-76888724 processed_pseudogene
ENSG00000275178 (RP11-4B16.3)
 ENST00000613063 (RP11-4B16.3-001) 77093086-77093446 antisense
ENSG00000275355 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000611637 (Metazoa_SRP.1-319) 76840838-76841102 misc_RNA
ENSG00000278330 (RP11-4B16.4)
 ENST00000611482 (RP11-4B16.4-002) 77112640-77115726 antisense
ENST00000612024 (RP11-4B16.4-001) 77112602-77114431 antisense
ENSG00000279433 (RP11-4B16.1)
 ENST00000624212 (RP11-4B16.1-001) 77108284-77110537 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000017_0001ENSDARG00000089413ENSDART00000130081ENSDART00000149070ENSDART00000149206ENSDART00000149570ENSDART00000149669ENSDART00000149778ENSDARG00000095869ENSDART00000149614ENSDARG00000095890ENSDART00000149720CIL_000017_0002ENSG00000130856ENST00000253159ENST00000320610ENST00000543926ENST00000579322ENST00000583095ENST00000583488ENST00000584565ENSG00000244229ENST00000481064ENSG00000265261ENST00000583058ENSG00000275178ENST00000613063ENSG00000275355ENST00000611637ENSG00000278330ENST00000611482ENST00000612024ENSG00000279433ENST00000624212
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000017_0001ENSDARG00000089413ENSDART00000130081ENSDART00000149070ENSDART00000149206ENSDART00000149570ENSDART00000149669ENSDART00000149778ENSDARG00000095869ENSDART00000149614ENSDARG00000095890ENSDART00000149720CIL_000017_0002ENSG00000130856ENST00000253159ENST00000320610ENST00000543926ENST00000579322ENST00000583095ENST00000583488ENSG00000244229ENST00000481064ENSG00000265261ENST00000583058ENSG00000275178ENST00000613063ENSG00000275355ENST00000611637ENSG00000278330ENST00000611482ENST00000612024ENSG00000279433ENST00000624212
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000089413 ENSDART00000130081 N/A N/A N/A 17.806±7.70 N/A N/A 10.282±6.43 20.321±11.91 N/A N/A N/A N/A N/A N/A
ENSDART00000149070 N/A N/A N/A 13.199±0.00 N/A N/A N/A 7.546±0.00 N/A N/A 40.955±0.00 N/A N/A N/A
ENSDART00000149206 N/A N/A N/A N/A N/A N/A 1.361±0.55 5.922±1.13 N/A N/A N/A N/A N/A N/A
ENSDART00000149570 N/A N/A N/A 94.346±58.65 N/A N/A N/A 12.166±0.00 N/A N/A 43.382±0.00 N/A N/A N/A
ENSDART00000149669 N/A N/A N/A 124.450±67.55 N/A N/A N/A 26.088±0.00 N/A N/A 30.392±0.00 N/A N/A N/A
ENSDART00000149778 N/A N/A N/A N/A N/A N/A 1.936±0.33 4.773±0.00 1.651±0.00 N/A N/A N/A N/A N/A
ENSDARG00000095869 ENSDART00000149614 N/A N/A N/A 1.106±0.29 N/A N/A 0.231±0.00 0.609±0.00 0.368±0.00 N/A N/A N/A N/A N/A
ENSDARG00000095890 ENSDART00000149720 N/A N/A N/A 4.952±0.00 N/A N/A 2.061±0.84 1.353±0.28 0.244±0.00 N/A 1.694±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130856 ENST00000253159 N/A N/A N/A 0.501±0.34 N/A 0.567±0.00 N/A N/A N/A 0.821±0.00 0.302±0.00 0.409±0.00 N/A 2.094±0.00
ENST00000320610 0.575±0.00 0.453±0.00 N/A 0.409±0.23 0.525±0.08 0.439±0.00 0.272±0.04 0.866±0.00 1.252±0.00 0.357±0.00 0.402±0.05 0.864±0.22 0.498±0.34 3.284±1.44
ENST00000543926 N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A 0.328±0.00 1.096±0.00
ENST00000579322 N/A N/A N/A 4.283±0.00 N/A N/A N/A N/A N/A N/A N/A 3.934±0.00 N/A N/A
ENST00000583095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.966±0.00 N/A N/A N/A
ENST00000583488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.366±0.00 N/A
ENST00000584565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244229 ENST00000481064 N/A 0.348±0.00 N/A N/A 0.461±0.40 0.382±0.00 0.028±0.00 N/A N/A 0.454±0.43 N/A 0.272±0.13 N/A N/A
ENSG00000265261 ENST00000583058 N/A 0.034±0.00 0.139±0.00 N/A 0.146±0.00 0.013±0.00 N/A N/A 0.016±0.00 0.099±0.00 N/A 0.165±0.13 0.020±0.00 0.036±0.03
ENSG00000275178 ENST00000613063 N/A 0.272±0.00 N/A 0.462±0.00 0.624±0.11 0.723±0.00 N/A 2.145±1.64 N/A 0.846±0.00 0.172±0.00 0.526±0.02 N/A 0.264±0.00
ENSG00000275355 ENST00000611637 0.452±0.00 0.197±0.00 N/A 0.471±0.00 1.537±0.00 0.778±0.00 0.389±0.00 0.438±0.00 0.220±0.12 0.553±0.00 0.091±0.00 0.620±0.36 0.537±0.00 1.483±0.92
ENSG00000278330 ENST00000611482 0.151±0.00 0.219±0.00 0.340±0.00 0.063±0.00 0.407±0.19 0.209±0.12 0.104±0.00 0.106±0.01 0.247±0.22 0.284±0.06 0.679±0.45 0.123±0.03 0.015±0.00 0.166±0.08
ENST00000612024 N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A 0.022±0.00 N/A N/A 0.182±0.00 0.096±0.00 0.122±0.00
ENSG00000279433 ENST00000624212 0.021±0.00 N/A 0.052±0.00 N/A 0.269±0.26 0.112±0.08 0.014±0.01 0.005±0.00 0.266±0.00 0.379±0.34 0.146±0.05 0.044±0.01 N/A 0.015±0.00

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