C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397932 TRPM2-007 ENSG00000142185 9606 + 21:44353688-44442358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaENST00000397932
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta
ENST00000397932 0.187±0.00 1.175±0.00 1.013±0.00 0.417±0.00 0.117±0.07 0.175±0.06 0.074±0.00 0.122±0.00 1.257±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005261 IEA cation channel activity
GO:0006811 IEA ion transport
GO:0006979 IEA response to oxidative stress
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0047631 IEA ADP-ribose diphosphatase activity
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105401 Trpm2-001 protein_coding Mus_musculus 0 3524
ENSMUST00000105400 Trpm2-002 processed_transcript Mus_musculus 0 3511
ENSMUST00000126206 Trpm2-007 retained_intron Mus_musculus 0 1932
ENSMUST00000153842 Trpm2-004 retained_intron Mus_musculus 0 1144
ENSMUST00000140471 Trpm2-005 retained_intron Mus_musculus 0 950

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