C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lipoxygenase homology domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398686 LOXHD1-008 ENSG00000167210 9606 - 18:46477273-46519086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryTestisENST00000398686
Transcript ID Adrenal Ovary Testis
ENST00000398686 0.108±0.00 0.129±0.12 4.409±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B1 CIL_0000B1_0002 CGP 18:46326809-46657033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IBA calcium channel activity
GO:0005515 IEA protein binding
GO:0007605 IMP sensory perception of sound
GO:0016020 IBA membrane
GO:0032420 ISS stereocilium
GO:0050982 IBA detection of mechanical stimulus
GO:0070588 IBA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096547 Loxhd1-201 protein_coding Mus_musculus 0 1892
ENSMUST00000123166 Loxhd1-004 protein_coding Mus_musculus 0 1892
ENSMUST00000123410 Loxhd1-003 protein_coding Mus_musculus 0 1696

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