C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165594 Sept7-202 ENSMUSG00000001833 10090 + 9:25252439-25308571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165594 14.566±1.36 2.864±1.45 48.803±1.22 35.507±1.63 9.478±1.63 5.080±0.54 13.208±0.85 7.253±1.46 16.638±12.73 18.028±3.72 19.247±1.07 18.131±23.98 48.822±7.57 7.624±3.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091M CIL_00091M_0002 VISTA 9:24673917-25275039
CIL_00091L CIL_00091L_0002 VISTA 9:24755368-25356389
CIL_0005M2 CIL_0005M2_0002 CGP 9:25108130-25308571
CIL_0001SS CIL_0001SS_0002 CGP 9:25252439-25604110

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0001725 IEA stress fiber
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005930 ISS axoneme
GO:0005938 IDA cell cortex
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0015629 IEA actin cytoskeleton
GO:0015630 IEA microtubule cytoskeleton
GO:0016324 ISS apical plasma membrane
GO:0016476 ISS regulation of embryonic cell shape
GO:0031105 IEA septin complex
GO:0042802 IEA identical protein binding
GO:0043679 IDA axon terminus
GO:0045202 IDA synapse
GO:0051291 IEA protein heterooligomerization
GO:0060271 ISS cilium morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327086 SEPT7P9-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 503
ENST00000338231 SEPT7P2-004 processed_transcript Homo_sapiens 0 835
ENST00000350320 SEPT7-201 protein_coding Homo_sapiens 0 3578
ENST00000398921 SEPT7P2-010 transcribed_unprocessed_pseudogene Homo_sapiens 0 1149
ENST00000399034 SEPT7-202 protein_coding Homo_sapiens 0 3208
ENST00000399035 SEPT7-203 protein_coding Homo_sapiens 0 3341
ENST00000413308 SEPT7P8-001 processed_pseudogene Homo_sapiens 0 425
ENST00000413357 SEPT7P2-005 retained_intron Homo_sapiens 0 219
ENST00000413875 SEPT7P2-006 retained_intron Homo_sapiens 0 608
ENST00000420492 SEPT7P7-001 processed_pseudogene Homo_sapiens 0 1373
ENST00000425198 SEPT7-003 nonsense_mediated_decay Homo_sapiens 0 1685
ENST00000428414 SEPT7P2-002 processed_transcript Homo_sapiens 0 617
ENST00000428867 SEPT7P2-009 retained_intron Homo_sapiens 0 363
ENST00000429741 SEPT7P2-001 processed_transcript Homo_sapiens 0 424
ENST00000432293 SEPT7-204 protein_coding Homo_sapiens 0 1803
ENST00000434048 SEPT7P5-001 processed_pseudogene Homo_sapiens 7.9874e-44 180
ENST00000435235 SEPT7-001 protein_coding Homo_sapiens 0 3567
ENST00000437076 SEPT7P4-001 unprocessed_pseudogene Homo_sapiens 3.99931e-42 174
ENST00000444755 SEPT7P2-007 processed_transcript Homo_sapiens 0 207
ENST00000449219 SEPT7P9-002 processed_transcript Homo_sapiens 0 353
ENST00000450436 SEPT7P2-008 processed_transcript Homo_sapiens 0 427
ENST00000455017 SEPT7P3-001 unprocessed_pseudogene Homo_sapiens 0 763
ENST00000469999 SEPT7P6-001 processed_pseudogene Homo_sapiens 0 1609
ENST00000473201 SEPT7-006 retained_intron Homo_sapiens 0 579
ENST00000475109 SEPT7-007 processed_transcript Homo_sapiens 0 730
ENST00000475691 SEPT7P9-008 processed_transcript Homo_sapiens 0 200
ENST00000485569 SEPT7-010 processed_transcript Homo_sapiens 0 390
ENST00000489259 SEPT7P9-006 processed_transcript Homo_sapiens 0 195
ENST00000492940 SEPT7-009 retained_intron Homo_sapiens 0 394
ENST00000508519 RP11-33B1.1-004 processed_transcript Homo_sapiens 0 355
ENST00000510011 RP11-33B1.1-003 processed_transcript Homo_sapiens 0 355
ENST00000511823 RP11-33B1.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000513147 RP11-33B1.1-012 retained_intron Homo_sapiens 0 351
ENST00000513820 RP11-950K24.2-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000515251 RP11-33B1.1-005 processed_transcript Homo_sapiens 0 237
ENST00000531666 RP11-347H15.5-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 375
ENST00000556211 RP11-173D9.5-001 processed_pseudogene Homo_sapiens 0 536
ENST00000572124 SEPT7P9-005 retained_intron Homo_sapiens 0 196
ENST00000604116 SEPT7P9-009 transcribed_unprocessed_pseudogene Homo_sapiens 0 520
ENST00000613964 RP11-220H4.6-001 unprocessed_pseudogene Homo_sapiens 7.00649e-44 180
ENST00000618315 SEPT7P9-004 processed_transcript Homo_sapiens 0 202
ENST00000622033 SEPT7P9-003 processed_transcript Homo_sapiens 0 353

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