C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class P
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399098 PIGP-003 ENSG00000185808 9606 - 21:37065374-37073170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399098
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399098 2.944±0.00 2.539±0.00 5.138±0.00 4.202±0.00 1.391±0.52 3.406±0.00 1.910±0.96 3.624±2.55 2.223±1.11 3.018±1.50 5.943±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CY CIL_0001CY_0002 CGP 21:37006150-37073170
CIL_0001CX CIL_0001CX_0002 CGP 21:37059170-37203112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000506 IDA glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0017176 IDA phosphatidylinositol N-acetylglucosaminyltransferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113910 Pigp-004 protein_coding Mus_musculus 2e-40 171
ENSMUST00000113917 Pigp-006 protein_coding Mus_musculus 6e-40 169
ENSMUST00000138514 Pigp-005 protein_coding Mus_musculus 6e-40 169
ENSMUST00000113906 Pigp-002 protein_coding Mus_musculus 6e-40 169
ENSMUST00000113914 Pigp-001 protein_coding Mus_musculus 2e-39 167
ENSMUST00000113905 Pigp-003 protein_coding Mus_musculus 8e-39 165
ENSMUST00000121642 Gm9001-001 processed_pseudogene Mus_musculus 1e-31 141

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