C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class P
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399103 PIGP-005 ENSG00000185808 9606 - 21:37065374-37073011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399103
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399103 6.924±0.00 2.930±0.00 3.855±1.37 3.542±0.00 8.645±0.00 4.220±2.18 3.857±1.06 3.679±1.62 2.591±0.52 5.866±4.54 7.654±4.63 6.681±3.06 12.420±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CY CIL_0001CY_0002 CGP 21:37006150-37073170
CIL_0001CX CIL_0001CX_0002 CGP 21:37059170-37203112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000506 IDA glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0017176 IDA phosphatidylinositol N-acetylglucosaminyltransferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113910 Pigp-004 protein_coding Mus_musculus 0 501
ENSMUST00000113906 Pigp-002 protein_coding Mus_musculus 0 496
ENSMUST00000113914 Pigp-001 protein_coding Mus_musculus 0 494
ENSMUST00000113905 Pigp-003 protein_coding Mus_musculus 0 492
ENSMUST00000121642 Gm9001-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000138514 Pigp-005 protein_coding Mus_musculus 0 442
ENSMUST00000113917 Pigp-006 protein_coding Mus_musculus 0 368

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