C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X3-C motif) receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399220 CX3CR1-001 ENSG00000168329 9606 - 3:39263494-39280034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399220 0.136±0.00 0.306±0.00 0.281±0.00 3.279±0.72 0.775±0.28 0.081±0.05 0.220±0.03 0.294±0.05 0.374±0.29 0.545±0.12 0.315±0.11 0.897±0.75 1.930±1.20 0.584±0.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004950 TAS chemokine receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006935 TAS chemotaxis
GO:0006968 TAS cellular defense response
GO:0007155 IEA cell adhesion
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0009611 TAS response to wounding
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064165 Cx3cr1-201 protein_coding Mus_musculus 0 861
ENSMUST00000177637 Cx3cr1-202 protein_coding Mus_musculus 0 861

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