C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 57
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399766 TMEM57-201 ENSG00000204178 9606 + 1:25430858-25500205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryPlacentaTestisENST00000399766
Transcript ID Colon Muscle Ovary Placenta Testis
ENST00000399766 0.806±0.00 0.724±0.00 9.066±0.00 9.144±0.00 16.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Q4 CIL_0003Q4_0002 CGP 1:25362249-25500209
CIL_0003Q1 CIL_0003Q1_0003 CGP 1:25430858-25568886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0031965 ISS nuclear membrane
GO:0044306 ISS neuron projection terminus
GO:0045202 ISS synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030628 Tmem57-001 protein_coding Mus_musculus 0 1546
ENSMUST00000137707 Tmem57-004 nonsense_mediated_decay Mus_musculus 0 787
ENSMUST00000150031 Tmem57-005 processed_transcript Mus_musculus 0 725
ENSMUST00000136113 Tmem57-002 retained_intron Mus_musculus 0 586
ENSMUST00000148595 Tmem57-003 nonsense_mediated_decay Mus_musculus 0 529

Loading