C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003Q1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005625-ENSDARG00000004311 CGP 7955 19:29786602-29846534
GeneTranscriptPositionBiotype
ENSDARG00000004311 (ldlrap1a)
low density lipoprotein receptor adaptor protein 1a
ENSDART00000021396 (ldlrap1a-001) 29820544-29846534 protein_coding
ENSDARG00000005625 (tmem57a)
transmembrane protein 57a
ENSDART00000009149 (tmem57a-001) 29786602-29816622 protein_coding
ENSDART00000142694 (tmem57a-002) 29786602-29803638 processed_transcript
CIL_0003Q1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012741-ENSDARG00000039750 CGP 7955 13:46144663-46238989
GeneTranscriptPositionBiotype
ENSDARG00000012741 (tmem57b)
transmembrane protein 57b
ENSDART00000019113 (tmem57b-201) 46144663-46192056 protein_coding
ENSDART00000074567 (tmem57b-001) 46144663-46190695 protein_coding
ENSDARG00000039750 (ldlrap1b)
low density lipoprotein receptor adaptor protein 1b
ENSDART00000058093 (ldlrap1b-201) 46218170-46238989 protein_coding
CIL_0003Q1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204178-ENSG00000157978 CGP 9606 1:25430858-25568886
GeneTranscriptPositionBiotype
ENSG00000157978 (LDLRAP1)
low density lipoprotein receptor adaptor protein 1
ENST00000374338 (LDLRAP1-001) 25543580-25568886 protein_coding
ENST00000462394 (LDLRAP1-007) 25554881-25557429 processed_transcript
ENST00000470950 (LDLRAP1-003) 25564591-25567636 processed_transcript
ENST00000474283 (LDLRAP1-005) 25563634-25567570 processed_transcript
ENST00000484476 (LDLRAP1-004) 25562816-25567000 processed_transcript
ENST00000485476 (LDLRAP1-006) 25549961-25554879 processed_transcript
ENST00000488127 (LDLRAP1-002) 25553364-25568884 processed_transcript
ENSG00000204178 (TMEM57)
transmembrane protein 57
ENST00000374343 (TMEM57-001) 25430920-25500209 protein_coding
ENST00000399766 (TMEM57-201) 25430858-25500205 protein_coding
ENST00000470035 (TMEM57-002) 25448893-25458783 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q1_0001ENSDARG00000004311ENSDART00000021396ENSDARG00000005625ENSDART00000009149ENSDART00000142694CIL_0003Q1_0002ENSDARG00000012741ENSDART00000019113ENSDART00000074567ENSDARG00000039750ENSDART00000058093CIL_0003Q1_0003ENSG00000157978ENST00000374338ENST00000462394ENST00000470950ENST00000474283ENST00000484476ENST00000485476ENST00000488127ENSG00000204178ENST00000374343ENST00000399766ENST00000470035
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q1_0001ENSDARG00000004311ENSDART00000021396ENSDARG00000005625ENSDART00000009149CIL_0003Q1_0002ENSDARG00000012741ENSDART00000019113ENSDART00000074567ENSDARG00000039750ENSDART00000058093CIL_0003Q1_0003ENSG00000157978ENST00000374338ENST00000462394ENST00000474283ENST00000485476ENST00000488127ENSG00000204178ENST00000374343ENST00000399766
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004311 ENSDART00000021396 N/A N/A N/A 2.585±0.03 N/A N/A 2.376±0.94 31.634±11.85 0.368±0.00 N/A 11.244±0.00 N/A N/A N/A
ENSDARG00000005625 ENSDART00000009149 N/A N/A N/A 7.229±1.70 N/A N/A 2.007±0.84 7.723±0.00 0.468±0.00 N/A 2.212±0.00 N/A N/A N/A
ENSDART00000142694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012741 ENSDART00000019113 N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000074567 N/A N/A N/A N/A N/A N/A N/A 0.464±0.26 0.127±0.00 N/A N/A N/A N/A N/A
ENSDARG00000039750 ENSDART00000058093 N/A N/A N/A 3.263±0.60 N/A N/A 1.890±0.97 2.312±0.00 0.230±0.00 N/A 1.413±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157978 ENST00000374338 4.170±0.00 6.728±0.00 0.368±0.00 4.592±3.63 5.433±5.04 3.850±1.98 1.693±1.38 4.818±3.95 2.398±2.03 3.798±2.71 2.102±1.70 10.173±6.86 19.133±5.28 6.228±1.18
ENST00000462394 N/A N/A N/A N/A 1.953±0.00 N/A N/A N/A N/A 2.992±0.00 N/A N/A N/A N/A
ENST00000470950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474283 N/A N/A N/A N/A N/A N/A N/A 0.872±0.00 N/A N/A N/A N/A N/A N/A
ENST00000484476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.279±0.00 N/A N/A N/A
ENST00000488127 N/A N/A N/A 0.126±0.00 0.223±0.00 N/A N/A N/A 0.096±0.00 0.806±0.28 0.413±0.00 N/A N/A N/A
ENSG00000204178 ENST00000374343 6.211±0.00 5.647±0.00 2.088±0.00 4.561±1.39 3.912±0.84 3.255±1.57 2.442±1.30 6.665±0.84 8.296±4.94 3.425±0.23 12.664±10.57 6.472±1.20 4.918±0.22 17.166±0.00
ENST00000399766 N/A N/A N/A N/A N/A 0.806±0.00 N/A N/A N/A N/A 0.724±0.00 9.066±0.00 9.144±0.00 16.904±0.00
ENST00000470035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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