C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400000 VAPA-001 ENSG00000101558 9606 + 18:9914002-9960021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000400000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000400000 7.804±0.00 8.382±0.00 1.314±0.00 10.469±3.85 5.578±2.72 5.696±3.88 3.690±1.91 2.960±1.11 2.987±0.75 3.485±0.90 3.856±2.42 9.169±6.15 3.461±0.27 5.839±3.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS:IEA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0005923 IDA tight junction
GO:0006665 TAS sphingolipid metabolic process
GO:0007165 IMP signal transduction
GO:0008219 IMP cell death
GO:0016021 IEA integral component of membrane
GO:0030148 TAS sphingolipid biosynthetic process
GO:0031175 IMP neuron projection development
GO:0031982 IDA vesicle
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044281 TAS small molecule metabolic process
GO:0046982 IPI protein heterodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061025 TAS membrane fusion
GO:0070972 IMP protein localization to endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024897 Vapa-201 protein_coding Mus_musculus 0 2263

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