C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400242 DEPDC5-002 ENSG00000100150 9606 + 22:31754069-31815988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000400242
Transcript ID Colon
ENST00000400242 1.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0001 CGP 22:31676256-31907034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005765 IDA lysosomal membrane
GO:0005829 ISS cytosol
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120902 Depdc5-014 protein_coding Mus_musculus 0 2388
ENSMUST00000049780 Depdc5-006 protein_coding Mus_musculus 0 2388
ENSMUST00000119705 Depdc5-002 protein_coding Mus_musculus 0 2388
ENSMUST00000087897 Depdc5-001 protein_coding Mus_musculus 0 2388
ENSMUST00000139098 Depdc5-004 retained_intron Mus_musculus 0 1796
ENSMUST00000118698 Depdc5-007 protein_coding Mus_musculus 0 920
ENSDART00000111088 depdc5-201 protein_coding Danio_rerio 0 750
ENSDART00000134059 depdc5-001 protein_coding Danio_rerio 0 750
ENSMUST00000139463 Depdc5-003 retained_intron Mus_musculus 0 726
ENSMUST00000149350 Depdc5-013 protein_coding Mus_musculus 0 723
ENSMUST00000125574 Depdc5-009 protein_coding Mus_musculus 0 627
ENSMUST00000150130 Depdc5-008 protein_coding Mus_musculus 1.99965e-42 178

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