C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400334 PIGN-004 ENSG00000197563 9606 - 18:62044549-62187038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000400334
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000400334 2.153±0.00 0.907±0.00 0.776±0.00 2.051±0.49 2.406±0.24 3.004±1.69 2.266±0.25 0.880±0.00 1.622±0.25 1.491±0.63 0.705±0.31 2.381±0.83 2.464±0.17 3.247±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FF CIL_0007FF_0001 CGP 18:61808063-62187118
CIL_00055U CIL_00055U_0001 CGP 18:62043567-62307829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070699 Pign-201 protein_coding Mus_musculus 0 3109
ENSMUST00000186485 Pign-001 protein_coding Mus_musculus 0 3109
ENSMUST00000190811 Pign-002 protein_coding Mus_musculus 0 2523
ENSMUST00000187537 Pign-003 protein_coding Mus_musculus 0 2523
ENSMUST00000191408 Pign-005 retained_intron Mus_musculus 0 1197
ENSMUST00000185983 Pign-004 retained_intron Mus_musculus 0 1059
ENSMUST00000190945 Pign-007 processed_transcript Mus_musculus 0 857
ENSMUST00000190139 Pign-006 processed_transcript Mus_musculus 0 856
ENSMUST00000188858 Pign-010 retained_intron Mus_musculus 0 364
ENSMUST00000186195 Pign-011 protein_coding Mus_musculus 0 211

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