C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176641-ENSG00000197563 CGP 9606 18:61808063-62187118
GeneTranscriptPositionBiotype
ENSG00000176641 (RNF152)
ring finger protein 152 		ENST00000312828 (RNF152-001) 61808063-61893759 protein_coding
ENST00000588064 (RNF152-003) 61875005-61893734 processed_transcript
ENST00000588396 (RNF152-002) 61888125-61894247 processed_transcript
ENST00000591306 (RNF152-004) 61816122-61894231 protein_coding
ENST00000619552 (RNF152-005) 61888063-61888854 processed_transcript
ENSG00000197563 (PIGN)
phosphatidylinositol glycan anchor biosynthesis, class N 		ENST00000357637 (PIGN-001) 62043567-62187024 protein_coding
ENST00000400334 (PIGN-004) 62044549-62187038 protein_coding
ENST00000585344 (PIGN-002) 62157764-62187118 protein_coding
ENST00000585458 (PIGN-012) 62154610-62187024 protein_coding
ENST00000585923 (PIGN-007) 62148310-62187047 protein_coding
ENST00000585926 (PIGN-006) 62157780-62186313 protein_coding
ENST00000586566 (PIGN-018) 62102897-62138286 protein_coding
ENST00000587134 (PIGN-010) 62161254-62187038 protein_coding
ENST00000587942 (PIGN-017) 62045342-62110150 retained_intron
ENST00000588571 (PIGN-003) 62157221-62187079 protein_coding
ENST00000588748 (PIGN-014) 62146996-62158005 protein_coding
ENST00000589098 (PIGN-015) 62154362-62157744 protein_coding
ENST00000589339 (PIGN-008) 62157750-62187013 protein_coding
ENST00000589414 (PIGN-019) 62118547-62148338 protein_coding
ENST00000589720 (PIGN-005) 62148322-62187056 protein_coding
ENST00000590765 (PIGN-009) 62154566-62187053 protein_coding
ENST00000590948 (PIGN-021) 62102811-62109957 nonsense_mediated_decay
ENST00000591238 (PIGN-013) 62148291-62158008 protein_coding
ENST00000592803 (PIGN-016) 62139047-62154572 nonsense_mediated_decay
ENST00000593225 (PIGN-011) 62162263-62187038 processed_transcript
ENSG00000267597 (RPIAP1)
ribose 5-phosphate isomerase A pseudogene 1 		ENST00000587900 (RPIAP1-001) 61957273-61958014 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007FF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047496-ENSMUSG00000056536 CGP 10090 1:105276914-105663677
GeneTranscriptPositionBiotype
ENSMUSG00000047496 (Rnf152)
ring finger protein 152 		ENSMUST00000058688 (Rnf152-001) 105276914-105356670 protein_coding
ENSMUST00000172299 (Rnf152-201) 105276917-105356710 protein_coding
ENSMUSG00000056536 (Pign)
phosphatidylinositol glycan anchor biosynthesis, class N 		ENSMUST00000070699 (Pign-201) 105518422-105659008 protein_coding
ENSMUST00000185209 (Pign-009) 105659178-105663672 retained_intron
ENSMUST00000185983 (Pign-004) 105646629-105663676 retained_intron
ENSMUST00000186195 (Pign-011) 105628328-105638261 protein_coding
ENSMUST00000186485 (Pign-001) 105518426-105663662 protein_coding
ENSMUST00000187537 (Pign-003) 105552630-105663643 protein_coding
ENSMUST00000187909 (Pign-008) 105658259-105663673 retained_intron
ENSMUST00000188858 (Pign-010) 105646783-105649651 retained_intron
ENSMUST00000190139 (Pign-006) 105521146-105569165 processed_transcript
ENSMUST00000190811 (Pign-002) 105556806-105663662 protein_coding
ENSMUST00000190945 (Pign-007) 105521137-105568948 processed_transcript
ENSMUST00000191408 (Pign-005) 105646629-105663677 retained_intron
ENSMUSG00000067017 (Gm3608)
predicted gene 3608 		ENSMUST00000086725 (Gm3608-201) 105455971-105458829 pseudogene
ENSMUSG00000076999 (Gm22426)
predicted gene, 22426 		ENSMUST00000103811 (Gm22426-201) 105574687-105574782 miRNA
ENSMUSG00000097482 (Gm17634)
predicted gene, 17634 		ENSMUST00000181383 (Gm17634-001) 105356007-105361630 antisense
ENSMUST00000186958 (Gm17634-003) 105357149-105357512 antisense
ENSMUST00000189938 (Gm17634-002) 105356763-105361737 antisense
ENSMUSG00000099582 (RP24-286I24.2)
predicted gene 29014 		ENSMUST00000191422 (RP24-286I24.2-001) 105321121-105321446 processed_pseudogene
ENSMUSG00000100672 (RP24-511K23.3)
predicted gene 28404 		ENSMUST00000190242 (RP24-511K23.3-001) 105564126-105564578 sense_intronic
ENSMUSG00000101219 (RP24-511K23.2)
predicted gene, 20302 		ENSMUST00000080671 (RP24-511K23.2-001) 105574537-105574811 processed_pseudogene
ENSMUSG00000101656 (RP24-511K23.4)
predicted gene 8004 		ENSMUST00000187782 (RP24-511K23.4-001) 105615742-105616358 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FF_0001ENSG00000176641ENST00000312828ENST00000588064ENST00000588396ENST00000591306ENST00000619552ENSG00000197563ENST00000357637ENST00000400334ENST00000585344ENST00000585458ENST00000585923ENST00000585926ENST00000586566ENST00000587134ENST00000587942ENST00000588571ENST00000588748ENST00000589098ENST00000589339ENST00000589414ENST00000589720ENST00000590765ENST00000590948ENST00000591238ENST00000592803ENST00000593225ENSG00000267597ENST00000587900CIL_0007FF_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FF_0001ENSG00000176641ENST00000312828ENST00000619552ENSG00000197563ENST00000357637ENST00000400334ENST00000585923ENST00000587942ENST00000588748ENST00000589720ENSG00000267597ENST00000587900CIL_0007FF_0002ENSMUSG00000047496ENSMUST00000058688ENSMUST00000172299ENSMUSG00000056536ENSMUST00000070699ENSMUST00000185209ENSMUST00000186485ENSMUST00000190139ENSMUST00000190811ENSMUST00000190945ENSMUSG00000067017ENSMUST00000086725ENSMUSG00000076999ENSMUST00000103811ENSMUSG00000097482ENSMUST00000181383ENSMUST00000189938ENSMUSG00000099582ENSMUST00000191422ENSMUSG00000100672ENSMUST00000190242ENSMUSG00000101219ENSMUST00000080671ENSMUSG00000101656ENSMUST00000187782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176641 ENST00000312828 N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A 0.803±0.00 N/A 0.521±0.00 N/A N/A
ENST00000588064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.061±0.00 N/A N/A N/A
ENSG00000197563 ENST00000357637 0.678±0.00 N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.881±0.24 0.624±0.27 N/A
ENST00000400334 2.153±0.00 0.907±0.00 0.776±0.00 2.051±0.49 2.406±0.24 3.004±1.69 2.266±0.25 0.880±0.00 1.622±0.25 1.491±0.63 0.705±0.31 2.381±0.83 2.464±0.17 3.247±1.86
ENST00000585344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585923 N/A N/A 5.047±0.00 6.796±0.00 7.033±0.00 14.962±0.00 5.695±0.00 N/A 5.402±0.00 N/A N/A N/A N/A N/A
ENST00000585926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587942 N/A 0.817±0.00 1.083±0.00 N/A N/A N/A N/A 1.622±0.00 N/A N/A 1.401±0.78 N/A N/A N/A
ENST00000588571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.425±0.00 N/A N/A 11.229±0.00
ENST00000589098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589720 N/A N/A N/A N/A N/A N/A N/A N/A 4.908±0.00 5.982±0.00 N/A 13.976±0.00 N/A N/A
ENST00000590765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267597 ENST00000587900 N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047496 ENSMUST00000058688 0.204±0.03 0.544±0.28 0.271±0.00 1.852±0.56 0.321±0.11 1.531±0.74 0.281±0.09 2.509±0.93 0.917±0.58 0.376±0.11 0.136±0.00 1.274±0.77 0.056±0.00 N/A
ENSMUST00000172299 0.353±0.09 0.250±0.00 0.655±0.16 1.823±0.71 0.224±0.18 0.733±0.24 0.148±0.03 0.858±0.20 0.503±0.35 0.285±0.06 0.101±0.04 1.037±0.44 0.046±0.02 0.140±0.08
ENSMUSG00000056536 ENSMUST00000070699 N/A N/A 1.189±0.37 1.387±0.58 0.613±0.09 N/A 0.442±0.00 N/A 0.823±0.00 N/A 0.347±0.10 1.978±0.70 1.194±0.05 0.761±0.00
ENSMUST00000185209 N/A N/A N/A N/A N/A 7.411±0.00 7.110±0.00 8.943±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000185983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186485 2.483±0.79 1.869±0.38 3.336±0.71 1.638±0.01 1.536±0.65 2.470±0.70 1.202±0.14 1.989±0.19 2.226±0.85 3.981±0.47 0.540±0.16 3.198±1.81 3.212±1.48 2.419±0.25
ENSMUST00000187537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.487±1.29
ENSMUST00000190811 N/A 1.330±0.00 N/A N/A 1.699±0.00 N/A N/A N/A N/A N/A N/A 2.053±0.72 N/A 2.170±1.01
ENSMUST00000190945 0.926±0.32 1.515±0.13 1.536±0.49 1.230±0.36 1.102±0.31 1.447±0.31 0.473±0.10 0.753±0.20 1.117±0.37 1.604±0.38 N/A 1.953±0.65 1.249±0.00 4.153±0.44
ENSMUST00000191408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067017 ENSMUST00000086725 0.142±0.00 0.392±0.25 0.148±0.10 6.577±0.00 0.544±0.46 1.190±0.73 N/A 0.175±0.02 1.871±3.35 0.145±0.00 0.024±0.01 0.555±0.34 1.282±1.93 0.559±0.16
ENSMUSG00000076999 ENSMUST00000103811 N/A N/A N/A 33.450±0.00 N/A N/A N/A N/A 5865.850±0.00 N/A N/A N/A 106.694±0.00 N/A
ENSMUSG00000097482 ENSMUST00000181383 0.263±0.04 0.442±0.17 N/A N/A 0.399±0.07 1.916±0.62 N/A N/A 1.056±0.04 0.176±0.03 N/A 2.114±1.15 N/A 0.128±0.00
ENSMUST00000186958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.251±0.00
ENSMUSG00000099582 ENSMUST00000191422 0.555±0.00 N/A N/A 0.170±0.01 0.305±0.00 0.726±0.00 N/A N/A 0.196±0.15 0.336±0.00 N/A N/A N/A N/A
ENSMUSG00000100672 ENSMUST00000190242 N/A N/A 0.054±0.00 0.050±0.02 N/A N/A N/A N/A 0.038±0.02 N/A N/A 0.100±0.02 0.144±0.09 0.066±0.00
ENSMUSG00000101219 ENSMUST00000080671 0.451±0.05 0.649±0.00 0.305±0.00 0.226±0.10 2.723±0.00 N/A 0.328±0.00 0.445±0.19 0.599±0.58 0.761±0.37 0.470±0.30 2.359±1.27 0.477±0.42 0.707±0.35
ENSMUSG00000101656 ENSMUST00000187782 0.094±0.00 0.272±0.07 0.144±0.06 0.142±0.00 0.143±0.04 0.147±0.01 0.088±0.03 0.393±0.00 0.108±0.09 0.180±0.12 N/A 0.279±0.13 0.077±0.00 0.106±0.04

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