C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin reductase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400521 TXNRD2-003 ENSG00000184470 9606 - 22:19875522-19941810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryTestisENST00000400521
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000400521 10.603±0.00 15.875±0.00 17.052±0.00 7.051±5.82 7.164±6.45 24.340±0.00 21.657±0.00 28.705±0.32 17.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004791 IEA thioredoxin-disulfide reductase activity
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0007507 IEA heart development
GO:0008033 IEA tRNA processing
GO:0016491 IEA oxidoreductase activity
GO:0030097 IEA hemopoiesis
GO:0045454 IEA cell redox homeostasis
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185160 AC133487.1-202 protein_coding Mus_musculus 0 1459
ENSMUST00000115606 Txnrd2-001 protein_coding Mus_musculus 0 1459
ENSMUST00000184600 AC133487.1-201 protein_coding Mus_musculus 0 1404
ENSMUST00000177856 Txnrd2-201 protein_coding Mus_musculus 0 1404
ENSMUST00000115605 Txnrd2-011 nonsense_mediated_decay Mus_musculus 0 1009
ENSMUST00000178093 Txnrd2-202 protein_coding Mus_musculus 0 953
ENSMUST00000115604 Txnrd2-002 protein_coding Mus_musculus 0 876
ENSMUST00000144233 Txnrd2-005 processed_transcript Mus_musculus 0 483
ENSMUST00000138310 Txnrd2-006 processed_transcript Mus_musculus 6e-28 130

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