C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TRAF3 interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400959 TRAF3IP3-011 ENSG00000009790 9606 + 1:209756032-209779655 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000400959
Transcript ID Lung Ovary
ENST00000400959 1.719±0.00 0.581±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089N CIL_00089N_0001 VISTA 1:209189712-209790617
CIL_0007ZL CIL_0007ZL_0001 VISTA 1:209515705-210116479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043550 Traf3ip3-001 protein_coding Mus_musculus 0 843
ENSMUST00000160332 Traf3ip3-004 retained_intron Mus_musculus 0 726
ENSMUST00000160302 Traf3ip3-006 processed_transcript Mus_musculus 0 351
ENSMUST00000162480 Traf3ip3-011 retained_intron Mus_musculus 0 274
ENSMUST00000159805 Traf3ip3-002 retained_intron Mus_musculus 0 231
ENSMUST00000161403 Traf3ip3-003 retained_intron Mus_musculus 0 231
ENSMUST00000159666 Traf3ip3-012 processed_transcript Mus_musculus 4.06377e-44 183

Loading