C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401460 RP1-72A23.3-001 ENSG00000220130 9606 + 6:89001548-89001814 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungOvaryTestisENST00000401460
Transcript ID Adipose Adrenal Breast Colon Lung Ovary Testis
ENST00000401460 0.078±0.00 0.083±0.00 0.089±0.00 0.079±0.00 0.159±0.00 0.513±0.00 0.372±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BS CIL_0006BS_0002 CGP 6:88610266-89085160

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134487 Fam221b-002 retained_intron Mus_musculus 2e-30 135
ENSMUST00000099475 Serf2-004 protein_coding Mus_musculus 2e-30 135
ENSMUST00000110615 Serf2-003 protein_coding Mus_musculus 2e-30 135
ENSMUST00000134412 Serf2-002 retained_intron Mus_musculus 2e-30 135
ENSMUST00000139253 Serf2-001 protein_coding Mus_musculus 2e-30 135
ENSMUST00000102482 Gm12481-001 processed_pseudogene Mus_musculus 0.0000000000003 79

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