C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small EDRK-rich factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110615 Serf2-003 ENSMUSG00000074884 10090 + 2:121449378-121451290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000110615
Transcript ID Brain Ovary Placenta
ENSMUST00000110615 28.490±0.00 63.176±0.00 116.395±43.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249786 SERF2-002 protein_coding Homo_sapiens 0 758
ENST00000339624 SERF2-005 protein_coding Homo_sapiens 0 619
ENST00000381359 SERF2-001 protein_coding Homo_sapiens 0 758
ENST00000401460 RP1-72A23.3-001 processed_pseudogene Homo_sapiens 2e-30 135
ENST00000402131 SERF2-006 protein_coding Homo_sapiens 0 451
ENST00000403425 SERF2-007 protein_coding Homo_sapiens 0 577
ENST00000409291 SERF2-013 protein_coding Homo_sapiens 0 250
ENST00000409614 SERF2-009 protein_coding Homo_sapiens 0 577
ENST00000409617 SERF2-016 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000409646 SERF2-014 protein_coding Homo_sapiens 0 267
ENST00000409960 SERF2-011 protein_coding Homo_sapiens 0 1223
ENST00000430901 SERF2-015 protein_coding Homo_sapiens 9.94922e-44 180
ENST00000445816 SERF2-003 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000448830 SERF2-010 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000475927 SERF2-008 retained_intron Homo_sapiens 5.04467e-44 182
ENST00000486144 SERF2-004 retained_intron Homo_sapiens 0 617
ENST00000620935 RP11-440E5.1-001 processed_pseudogene Homo_sapiens 1e-24 113

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