C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401710 NRXN1-015 ENSG00000179915 9606 - 2:49920350-50496076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverMuscleTestisENST00000401710
Transcript ID Brain Breast Heart Liver Muscle Testis
ENST00000401710 16.006±0.00 0.271±0.23 0.380±0.00 1.622±0.00 0.036±0.00 0.400±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174331 Nrxn1-015 protein_coding Mus_musculus 0 1969
ENSMUST00000174337 Nrxn1-016 protein_coding Mus_musculus 0 1495
ENSMUST00000160844 Nrxn1-001 protein_coding Mus_musculus 0 1253
ENSMUST00000160800 Nrxn1-014 protein_coding Mus_musculus 0 1243
ENSMUST00000159778 Nrxn1-009 protein_coding Mus_musculus 0 1177
ENSMUST00000161402 Nrxn1-011 protein_coding Mus_musculus 0 1000
ENSMUST00000054059 Nrxn1-020 protein_coding Mus_musculus 0 1000
ENSMUST00000172466 Nrxn1-017 protein_coding Mus_musculus 0 1000
ENSMUST00000161102 Nrxn1-013 retained_intron Mus_musculus 0 976
ENSMUST00000072671 Nrxn1-002 protein_coding Mus_musculus 0 976
ENSMUST00000176118 Nrxn1-012 protein_coding Mus_musculus 0 835
ENSMUST00000173222 Nrxn1-005 processed_transcript Mus_musculus 0 710
ENSMUST00000173917 Nrxn1-010 protein_coding Mus_musculus 0 630
ENSMUST00000161637 Nrxn1-004 processed_transcript Mus_musculus 0 477
ENSMUST00000176918 Nrxn1-019 processed_transcript Mus_musculus 0 270

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