C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160844 Nrxn1-001 ENSMUSG00000024109 10090 - 17:90033644-91092805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMusclePlacentaENSMUST00000160844
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Placenta
ENSMUST00000160844 0.078±0.02 12.638±9.36 0.058±0.03 0.030±0.00 0.022±0.00 0.114±0.06 0.087±0.00 0.010±0.00 0.004±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IGI calcium channel regulator activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 ISS plasma membrane
GO:0007155 IEA cell adhesion
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0007612 IMP learning
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030534 IMP adult behavior
GO:0033130 IDA acetylcholine receptor binding
GO:0035176 IEA social behavior
GO:0042297 IEA vocal learning
GO:0042734 IDA presynaptic membrane
GO:0050839 IPI cell adhesion molecule binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0051965 IGI positive regulation of synapse assembly
GO:0051968 IMP positive regulation of synaptic transmission, glutamatergic
GO:0060134 IMP prepulse inhibition
GO:0061178 IMP regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0071625 IEA vocalization behavior
GO:0090129 IDA positive regulation of synapse maturation
GO:0097104 IDA postsynaptic membrane assembly
GO:0097109 IPI neuroligin family protein binding
GO:0097116 IDA gephyrin clustering
GO:0097118 IDA neuroligin clustering
GO:0097119 IDA postsynaptic density protein 95 clustering
GO:2000463 IMP positive regulation of excitatory postsynaptic membrane potential
GO:2000821 IMP regulation of grooming behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088178 nrxn1a-201 protein_coding Danio_rerio 0 1596
ENSDART00000093094 nrxn1a-001 protein_coding Danio_rerio 0 1596
ENSDART00000111239 nrxn1a-202 protein_coding Danio_rerio 0 1565
ENSDART00000090934 nrxn3b-202 protein_coding Danio_rerio 0 429
ENSDART00000127050 nrxn3b-203 protein_coding Danio_rerio 0 429
ENSDART00000090646 nrxn3b-201 protein_coding Danio_rerio 0 420
ENSDART00000149694 nrxn3b-001 protein_coding Danio_rerio 0 398
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 0 577
ENST00000301894 NRXN2-003 protein_coding Homo_sapiens 0 305
ENST00000331040 NRXN1-006 processed_transcript Homo_sapiens 0 2004
ENST00000342183 NRXN1-012 protein_coding Homo_sapiens 0 1456
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 0 577
ENST00000378262 NRXN1-017 protein_coding Homo_sapiens 0 852
ENST00000401669 NRXN1-003 protein_coding Homo_sapiens 0 6822
ENST00000401710 NRXN1-015 protein_coding Homo_sapiens 0 1253
ENST00000402717 NRXN1-201 protein_coding Homo_sapiens 0 3386
ENST00000404971 NRXN1-002 protein_coding Homo_sapiens 0 5461
ENST00000405472 NRXN1-010 protein_coding Homo_sapiens 0 6667
ENST00000405581 NRXN1-004 protein_coding Homo_sapiens 0 1386
ENST00000406316 NRXN1-001 protein_coding Homo_sapiens 0 5426
ENST00000406859 NRXN1-202 protein_coding Homo_sapiens 0 3443
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 0 577
ENST00000412315 NRXN1-016 protein_coding Homo_sapiens 0 852
ENST00000462791 NRXN1-009 processed_transcript Homo_sapiens 0 237
ENST00000474354 NRXN1-014 retained_intron Homo_sapiens 0 431
ENST00000484192 NRXN1-011 processed_transcript Homo_sapiens 0 852
ENST00000495871 NRXN1-008 processed_transcript Homo_sapiens 0 640
ENST00000611589 NRXN1-203 protein_coding Homo_sapiens 0 1253

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