C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172466 Nrxn1-017 ENSMUSG00000024109 10090 - 17:90037077-90455886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastENSMUST00000172466
Transcript ID Adipose Breast
ENSMUST00000172466 0.169±0.05 0.110±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IPI protein binding
GO:0005886 ISS plasma membrane
GO:0007157 IDA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007158 IDA neuron cell-cell adhesion
GO:0009986 ISS cell surface
GO:0016021 IEA integral component of membrane
GO:0016339 IDA calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0021707 IGI cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0030139 ISS endocytic vesicle
GO:0035418 IDA protein localization to synapse
GO:0042551 IDA neuron maturation
GO:0044295 IDA axonal growth cone
GO:0045184 IDA establishment of protein localization
GO:0046872 IEA metal ion binding
GO:0048306 IDA calcium-dependent protein binding
GO:0050839 IPI cell adhesion molecule binding
GO:0051490 IDA negative regulation of filopodium assembly
GO:0051968 IDA positive regulation of synaptic transmission, glutamatergic
GO:0060076 IC excitatory synapse
GO:0060077 IC inhibitory synapse
GO:0090004 IDA positive regulation of establishment of protein localization to plasma membrane
GO:0097091 IDA synaptic vesicle clustering
GO:0097104 IDA postsynaptic membrane assembly
GO:0097105 IDA presynaptic membrane assembly
GO:0097109 IPI neuroligin family protein binding
GO:0097112 IDA gamma-aminobutyric acid receptor clustering
GO:0097114 IDA N-methyl-D-aspartate receptor clustering
GO:0097116 IDA gephyrin clustering
GO:0097117 IDA guanylate kinase-associated protein clustering
GO:0097118 IDA neuroligin clustering
GO:0097119 IDA postsynaptic density protein 95 clustering
GO:0097120 IDA receptor localization to synapse
GO:2000310 IDA regulation of N-methyl-D-aspartate selective glutamate receptor activity
GO:2000311 IDA regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
GO:2000463 IDA positive regulation of excitatory postsynaptic membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 0 305
ENST00000301894 NRXN2-003 protein_coding Homo_sapiens 0 316
ENST00000331040 NRXN1-006 processed_transcript Homo_sapiens 0 231
ENST00000342183 NRXN1-012 protein_coding Homo_sapiens 0 1664
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 0 305
ENST00000378262 NRXN1-017 protein_coding Homo_sapiens 0 516
ENST00000401669 NRXN1-003 protein_coding Homo_sapiens 0 1661
ENST00000401710 NRXN1-015 protein_coding Homo_sapiens 0 1000
ENST00000404971 NRXN1-002 protein_coding Homo_sapiens 0 1661
ENST00000405472 NRXN1-010 protein_coding Homo_sapiens 0 1661
ENST00000406316 NRXN1-001 protein_coding Homo_sapiens 0 1000
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 0 305
ENST00000412315 NRXN1-016 protein_coding Homo_sapiens 0 521
ENST00000484192 NRXN1-011 processed_transcript Homo_sapiens 0 462
ENST00000611589 NRXN1-203 protein_coding Homo_sapiens 0 1000

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