C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401722 SLC25A3-008 ENSG00000075415 9606 + 12:98593591-98606379 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryTestisENST00000401722
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Testis
ENST00000401722 1.830±0.00 8.867±1.98 2.160±0.00 4.300±2.18 4.771±0.08 1.553±0.00 3.443±1.81 3.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0001 VISTA 12:98189717-98793261
CIL_0000VM CIL_0000VM_0002 CGP 12:98515512-98606379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005887 TAS integral component of plasma membrane
GO:0006091 TAS generation of precursor metabolites and energy
GO:0006810 TAS transport
GO:0015293 IEA symporter activity
GO:0015320 TAS phosphate ion carrier activity
GO:0016020 IDA membrane
GO:0032403 IDA protein complex binding
GO:0035435 TAS phosphate ion transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076694 Slc25a3-001 protein_coding Mus_musculus 0 1609
ENSMUST00000164505 Slc25a3-004 protein_coding Mus_musculus 0 1463
ENSMUST00000170810 Slc25a3-002 protein_coding Mus_musculus 0 1376
ENSMUST00000163246 Slc25a3-005 nonsense_mediated_decay Mus_musculus 0 1182
ENSMUST00000167455 Slc25a3-008 retained_intron Mus_musculus 0 905
ENSMUST00000171960 Slc25a3-006 retained_intron Mus_musculus 0 632
ENSMUST00000121901 Gm13904-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000169339 Slc25a3-007 processed_transcript Mus_musculus 0 481
ENSMUST00000172442 Slc25a3-003 retained_intron Mus_musculus 0 224
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000000009 75
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000009 58

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