C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402412 R3HDM2-003 ENSG00000179912 9606 - 12:57253765-57431005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000402412
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000402412 12.922±0.00 5.906±0.00 2.657±0.00 5.554±0.00 7.265±2.79 5.707±1.97 4.875±3.03 4.059±2.61 3.273±0.00 9.063±0.00 6.937±5.12 4.497±0.47 9.548±1.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105249 R3hdm2-006 protein_coding Mus_musculus 0 4146
ENSMUST00000169888 R3hdm2-004 protein_coding Mus_musculus 0 3011
ENSMUST00000164161 R3hdm2-008 nonsense_mediated_decay Mus_musculus 0 2806
ENSMUST00000164831 R3hdm2-002 protein_coding Mus_musculus 0 2763
ENSMUST00000064793 R3hdm2-003 protein_coding Mus_musculus 0 2241
ENSMUST00000105250 R3hdm2-202 protein_coding Mus_musculus 0 2237
ENSMUST00000077046 R3hdm2-201 protein_coding Mus_musculus 0 2237
ENSMUST00000105251 R3hdm2-005 protein_coding Mus_musculus 0 2237
ENSMUST00000170336 R3hdm2-007 protein_coding Mus_musculus 0 2237
ENSMUST00000166820 R3hdm2-001 protein_coding Mus_musculus 0 2237
ENSMUST00000191337 RP23-424A2.2-001 processed_pseudogene Mus_musculus 0 1339
ENSMUST00000171823 R3hdm2-018 processed_transcript Mus_musculus 0 593
ENSMUST00000168268 R3hdm2-015 retained_intron Mus_musculus 0 538
ENSMUST00000168079 R3hdm2-017 protein_coding Mus_musculus 0 525
ENSMUST00000171426 R3hdm2-016 protein_coding Mus_musculus 0 466
ENSMUST00000168780 R3hdm2-012 protein_coding Mus_musculus 0 372
ENSMUST00000164469 R3hdm2-014 retained_intron Mus_musculus 0 366
ENSMUST00000163794 R3hdm2-013 retained_intron Mus_musculus 0 350
ENSMUST00000165440 R3hdm2-019 protein_coding Mus_musculus 0 283
ENSMUST00000170164 R3hdm2-009 protein_coding Mus_musculus 0 244
ENSMUST00000171434 R3hdm2-011 protein_coding Mus_musculus 0 235

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