C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT and RLD domain containing E3 ubiquitin protein ligase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402738 HERC3-001 ENSG00000138641 9606 + 4:88592423-88708542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000402738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000402738 2.601±0.00 2.113±0.00 3.464±0.00 3.514±0.46 1.435±0.00 2.030±0.00 3.279±0.00 2.411±0.00 1.664±0.00 2.580±0.00 0.987±0.00 3.572±0.00 2.492±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041401 Herc3-001 protein_coding Mus_musculus 0 4076
ENSMUST00000031823 Herc3-002 protein_coding Mus_musculus 0 3360
ENSMUST00000154290 Herc3-006 processed_transcript Mus_musculus 0 387
ENSMUST00000131132 Herc3-008 processed_transcript Mus_musculus 0 279

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