C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 162kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403245 CEP162-004 ENSG00000135315 9606 - 6:84124241-84227635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverLungOvaryPlacentaTestisENST00000403245
Transcript ID Adipose Brain Breast Liver Lung Ovary Placenta Testis
ENST00000403245 0.230±0.00 0.191±0.12 0.701±0.47 0.610±0.00 0.171±0.00 0.540±0.23 0.240±0.15 2.604±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000819 CIL_000819_0001 VISTA 6:83751774-84353626
CIL_000674 CIL_000674_0001 CGP 6:84033756-84227635
CIL_00066X CIL_00066X_0001 CGP 6:84124241-84764519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0005879 IDA axonemal microtubule
GO:0042384 IMP cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093802 Cep162-001 protein_coding Mus_musculus 0 3264
ENSMUST00000144137 Cep162-002 retained_intron Mus_musculus 0 604
ENSMUST00000139301 Cep162-003 processed_transcript Mus_musculus 0 409

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