C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: X-box binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403532 XBP1-006 ENSG00000100219 9606 - 22:28794557-28800558 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0001 VISTA 22:28282570-28883176
CIL_0004TU CIL_0004TU_0002 CGP 22:28794555-29057487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063084 Xbp1-001 protein_coding Mus_musculus 0 1182
ENSMUST00000149623 Xbp1-004 protein_coding Mus_musculus 0 713
ENSMUST00000149159 Xbp1-003 protein_coding Mus_musculus 0 529
ENSMUST00000145588 Xbp1-002 retained_intron Mus_musculus 0 254

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