C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-box binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063084 Xbp1-001 ENSMUSG00000020484 10090 + 11:5520659-5525893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063084 64.123±23.26 89.393±16.57 31.965±1.82 10.814±4.53 85.978±9.32 84.439±14.90 18.476±6.45 42.839±7.03 67.979±41.56 73.167±2.87 17.468±4.84 62.328±21.11 49.908±8.55 2.630±1.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0002070 IMP epithelial cell maturation
GO:0005634 IEA nucleus
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0030968 IEA endoplasmic reticulum unfolded protein response
GO:0031017 IMP exocrine pancreas development
GO:0042493 IEA response to drug
GO:0042593 IDA glucose homeostasis
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051602 IEA response to electrical stimulus
GO:0060096 IEA serotonin secretion, neurotransmission
GO:0060691 IMP epithelial cell maturation involved in salivary gland development
GO:0071236 IEA cellular response to antibiotic
GO:1900103 IEA positive regulation of endoplasmic reticulum unfolded protein response
GO:1901800 IDA positive regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216037 XBP1-001 protein_coding Homo_sapiens 0 1251
ENST00000344347 XBP1-007 protein_coding Homo_sapiens 0 996
ENST00000403532 XBP1-006 protein_coding Homo_sapiens 0 1182
ENST00000405219 XBP1-003 protein_coding Homo_sapiens 0 1162
ENST00000436573 XBP1P1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000482720 XBP1-005 retained_intron Homo_sapiens 0 207
ENST00000484256 XBP1-004 retained_intron Homo_sapiens 0 931
ENST00000611155 XBP1-201 protein_coding Homo_sapiens 0 1083

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