C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403662 CSF2RB-001 ENSG00000100368 9606 + 22:36913628-36940449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungOvaryPlacentaENST00000403662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Ovary Placenta
ENST00000403662 2.233±0.00 34.469±0.00 0.031±0.00 0.670±0.00 0.790±0.20 1.328±0.00 0.273±0.00 3.003±0.67 0.618±0.65 23.646±19.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GY CIL_0003GY_0001 CGP 22:36860988-36940449
CIL_00036S CIL_00036S_0001 CGP 22:36913628-37007841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0004896 IEA cytokine receptor activity
GO:0004912 TAS interleukin-3 receptor activity
GO:0004914 TAS interleukin-5 receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0007165 NAS signal transduction
GO:0007585 TAS respiratory gaseous exchange
GO:0016021 IEA integral component of membrane
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0030526 TAS granulocyte macrophage colony-stimulating factor receptor complex
GO:0032496 IEA response to lipopolysaccharide
GO:0036016 TAS cellular response to interleukin-3
GO:0038043 TAS interleukin-5-mediated signaling pathway
GO:0038156 TAS interleukin-3-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096355 Csf2rb-201 protein_coding Mus_musculus 0 715
ENSMUST00000096356 Csf2rb2-201 protein_coding Mus_musculus 0 682

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