C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003GY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100365-ENSG00000100368 CGP 9606 22:36860988-36940449
GeneTranscriptPositionBiotype
ENSG00000100365 (NCF4)
neutrophil cytosolic factor 4, 40kDa
ENST00000248899 (NCF4-001) 36860988-36878015 protein_coding
ENST00000397147 (NCF4-002) 36860988-36878015 protein_coding
ENST00000415063 (NCF4-003) 36872137-36877764 protein_coding
ENST00000447071 (NCF4-004) 36860988-36875832 protein_coding
ENSG00000100368 (CSF2RB)
colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
ENST00000262825 (CSF2RB-201) 36913633-36940433 protein_coding
ENST00000403662 (CSF2RB-001) 36913628-36940449 protein_coding
ENST00000406230 (CSF2RB-002) 36922134-36938611 protein_coding
ENST00000421539 (CSF2RB-003) 36922612-36930744 protein_coding
CIL_0003GY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071715-ENSMUSG00000071714 CGP 10090 15:78244801-78305603
GeneTranscriptPositionBiotype
ENSMUSG00000071714 (Csf2rb2)
colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
ENSMUST00000096356 (Csf2rb2-201) 78282517-78305603 protein_coding
ENSMUSG00000071715 (Ncf4)
neutrophil cytosolic factor 4
ENSMUST00000096357 (Ncf4-001) 78244801-78262580 protein_coding
ENSMUST00000126028 (Ncf4-004) 78253246-78260769 processed_transcript
ENSMUST00000133618 (Ncf4-002) 78244844-78260994 protein_coding
ENSMUST00000146147 (Ncf4-005) 78255452-78260802 retained_intron
ENSMUST00000147303 (Ncf4-003) 78253032-78256030 retained_intron
ENSMUST00000148646 (Ncf4-006) 78260878-78262575 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GY_0001ENSG00000100365ENST00000248899ENST00000397147ENST00000415063ENST00000447071ENSG00000100368ENST00000262825ENST00000403662ENST00000406230ENST00000421539CIL_0003GY_0002ENSMUSG00000071714ENSMUST00000096356ENSMUSG00000071715ENSMUST00000096357ENSMUST00000126028ENSMUST00000133618ENSMUST00000146147ENSMUST00000147303ENSMUST00000148646
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GY_0001ENSG00000100365ENST00000248899ENST00000397147ENST00000415063ENST00000447071ENSG00000100368ENST00000262825ENST00000403662ENST00000406230ENST00000421539CIL_0003GY_0002ENSMUSG00000071714ENSMUST00000096356ENSMUSG00000071715ENSMUST00000096357ENSMUST00000133618ENSMUST00000146147ENSMUST00000147303ENSMUST00000148646
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100365 ENST00000248899 5.120±0.00 12.641±0.00 0.236±0.00 0.738±0.35 N/A 1.379±0.11 1.346±1.27 1.612±0.99 2.527±0.10 6.780±3.34 N/A 2.835±1.11 24.831±9.76 0.982±0.38
ENST00000397147 N/A 4.243±0.00 N/A N/A 1.236±0.13 N/A 0.334±0.00 N/A N/A 4.378±0.00 0.204±0.15 1.109±0.00 N/A 0.493±0.00
ENST00000415063 N/A N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A N/A N/A 2.707±0.00 17.743±0.00 0.653±0.00
ENST00000447071 N/A N/A 0.260±0.00 N/A N/A 1.452±0.00 0.151±0.00 N/A N/A N/A 0.256±0.00 N/A N/A 0.449±0.00
ENSG00000100368 ENST00000262825 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A 2.836±0.00 0.244±0.00
ENST00000403662 2.233±0.00 34.469±0.00 0.031±0.00 0.670±0.00 0.790±0.20 1.328±0.00 0.273±0.00 N/A N/A 3.003±0.67 N/A 0.618±0.65 23.646±19.76 N/A
ENST00000406230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A 1.496±0.00
ENST00000421539 N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071714 ENSMUST00000096356 4.694±0.52 0.758±0.38 2.756±0.02 0.090±0.01 20.566±4.50 1.399±0.25 0.330±0.22 1.215±0.84 1.167±0.87 4.009±0.32 0.440±0.25 2.889±1.36 0.327±0.26 0.213±0.07
ENSMUSG00000071715 ENSMUST00000096357 1.967±0.35 0.606±0.30 5.577±1.26 0.192±0.04 7.522±1.92 2.042±0.62 0.677±0.23 0.982±0.47 4.340±5.12 4.323±0.65 0.396±0.54 1.395±0.76 0.570±0.26 0.186±0.01
ENSMUST00000126028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133618 N/A 0.850±0.16 N/A 0.109±0.00 N/A 1.757±0.00 0.353±0.00 0.465±0.20 N/A 2.171±0.00 0.077±0.02 0.402±0.21 0.151±0.00 0.357±0.20
ENSMUST00000146147 N/A N/A N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A 1.758±0.00 0.645±0.38 N/A
ENSMUST00000147303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.111±0.00 N/A
ENSMUST00000148646 N/A 0.600±0.00 N/A 0.169±0.00 N/A N/A 0.406±0.00 0.631±0.05 20.735±8.71 N/A 0.456±0.53 0.803±0.22 3.673±3.28 0.102±0.00

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