C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: parvin, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404989 PARVB-003 ENSG00000188677 9606 + 22:44069061-44169184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404989 25.208±0.00 27.840±0.00 0.688±0.00 5.402±2.68 11.119±9.96 9.466±8.48 25.997±0.00 10.565±0.00 2.874±0.20 10.819±9.15 29.623±23.38 18.814±12.82 22.385±4.39 6.562±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HG CIL_0008HG_0001 VISTA 22:43702370-44303917
CIL_0004UY CIL_0004UY_0001 CGP 22:43923739-44010531
CIL_0006F0 CIL_0006F0_0001 CGP 22:43955421-44172949
CIL_0000V6 CIL_0000V6_0002 CGP 22:43999211-44219533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0030027 IDA lamellipodium
GO:0030031 IMP cell projection assembly
GO:0030032 IMP lamellipodium assembly
GO:0031532 IMP actin cytoskeleton reorganization
GO:0034329 TAS cell junction assembly
GO:0071963 IMP establishment or maintenance of cell polarity regulating cell shape

Homologs

No Homologs available.

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